| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3164 |
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| Symbol | |
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| ID | 3680720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 3927057 |
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| End bp | 3929999 |
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| Gene Length | 2943 bp |
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| Protein Length | 980 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637718513 |
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| Product | Cna B-type |
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| Protein accession | YP_323667 |
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| Protein GI | 75909371 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.592408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0320112 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTACG ATCGCCCCCC AATTTCCCCC CCACCAATCA CACCACATTC GTTAGTAAGT
TCTATTCCCA CACCCCAAGA TAATGATCAT AGCCAAACGG CTGATACATT TAAGTATGCG
ATCGCTACTC CTAGTGAACT AGAAACATTT CCCAATGAGT TCTCTACAGG TGTTTCACCG
CAGCTTTTTA CAACAGAACA TTTTAGTGAG GAACTCATTA CTCAACATAT AGTTAGCGAA
CTACCTGTTG GTAATACGAG TAACAATAAC GTCACCAATA TCCCAGGAAT ATCTACTGTT
GACAATATTA AACAAGCTCC TAAAGCTGAA TCTTCTCCAC CAAATTTGGG TAAACCGGAA
AAAGATAATG GTGTCACAGC ACCAGTAAAT ACAACAGATA CAATTACTTT TACCGAAACT
TCTAGTTCTG GTATAGAAAC TTTATTACTA GGGGTAATTA TTAACCGTAG AGAAGTTGGT
AGTTTAGATG TTATACGTCG AGGAAATACC TTACTAGTAC CTTTAGAAAA CTTTGCTCAA
CTTACAGGCT TAACCATTAC AACAACTGAT GATACTACAG AAATCAAAAC ACCTCTAGGT
GCTGTGAAAC TAGCGTCTAG TGAACTAGAG ATAATTCAGG GAATTACCCA TATTAGCGAT
TCTTTATTAC AAGAAAAACT CAATACCACA ATCGAGTTGA GGTCTTTAGA AGCAGCTTTG
ATTGTTGGGT TACCTTGGTT ATCAGGTAGT AGAGAAGCGC GAAATGCAGC AATTGATCTA
GAACCAGAAG TTAAAGCACC GCTAAGTGGA TTGTCTAGTT TTAGACAGGA ACTTAATGTT
GTTAATGATT CTGGTGGTAC TCGGTTCCAG AGTTATAGTT TGTTGGGTGG GAGACTCGCT
GGCGGGACTT GGCGTATACG TTTAAATAAT AATTTTGAAA ATTCTCCCAA CTTAGCTGAA
TATTTTTTCT ATAAACGTAA TGGTAGATTT CTTTATCAAT TAGGTCGTCA ACAAATAAGT
GTACATCCCC TATTAAATGG GCAAATTTTA ACGGGCGCAC AATTTGGTTA CACTAATTTA
CCCGCAGATC GCTATAGACA AAGTTATAGT GCTAATCAGT TAATACCAAG AAGTTCTCGT
TCTGTACAAA CATTTCGAGG CGAAGTTCCT CCAGCCAGTT TTGTGCAACT GCGAGTTGGT
AGTAGAATAA TTGCCCAACA GCAGGTAGGA TTTGATGGAA GATACGAATT TTTTGATGTA
AATTTGCCTG CTGGACAAAA TAATTTAATT GAAGTTTTGG TTTACGATCG CAACAATTTC
AGTGTACCTA TTGAAATTCG CTCTGTGAGA CTCAACACCT CAGATTTACT ATTACCTCCA
GGTGGTAATG TACAGTTATT GGGTTTGGGT TTTAGTGGTA ACTTAGCTCA AAATGCTTTT
TCTGACGATT ATAATACCTC TGATTCTGGT AGCCTTGTGG GCTTTTATCA ATTTAGGCAA
GGTCTATCAG ATAATTTTAC TGTTGAAGCT GGACTACAAG CAATTCCGAA TACTTTCCAA
ACTCAATTAG GTGCAATTTG GCGTATAGCC AATCCTGTGA TTTTATCGGG TAGCGTGGGT
ACATCTTTTG GTAAGCTTGC TTATAATGCA GATTTAGATG TTCAGTTAGG TGGATTAGAT
ATAAATGCTA ATTCTCAGCT ATTCCCCGAA GGTTATAGAA GTGATAATGG CTCAAGAGAA
AGATATAATC ATAGCTTAGA AGTAGGTTAT CGCTTCAATA GTAATTTGAG GTTGGGAGTT
TTAGCACGTA GTCGCAAATC TGATTCAAAC TCAACTGAAT ACATTGCACC TACTTTCTAT
TTCCGTCCCT CTAATAGTTT ATATTTTACA GGTAGACCTG ACACTGAAGG GCAATATCTG
TTTTATTCGG CATATCAACC TAATGCTTTA ACTCGATTAT CATTTAGTAG CTTTGGTGAT
AACTATGCTA CGGATTTCAG TTATAAATTA AACAATAATT ATCAGTTATC TTTGGGTAGT
GATTTCGGTG GTAATCTACC AGCTCGCTAC CTTGCTACAG TAAATTATTA TCCCAGAAAT
ATTAGAGGAT TTAGTTGGAG GTTAGGGCTT GCTTATCGGG ATGGCGATGT GGGGCCAATT
GTTGGTGCTA GCACCCAATT GATACCGGGT CTATTTGCTA GAGTCGAATA TCAAGCTATA
CCTTCCAGGG CTAGAAGTAA TTTTGGTGGA TGGGGAGATG ATCGCCTGAC AATTTCTCTA
GTATCCGATT TATCATTCTC TGATGGTAGA ATCTCCCCAG GTAACTTTAA CTCTTTTGGG
AAAGATAAGG GAGCGATTTC TGGACGTATT TTTGTCGAAG GAAGTAAAGA AAGCTTTGAT
TTAGGCGAGT CTAGTGTCCG AGTTACAGAC AAATACGGTA AGATTATCGG TGGTGCGAGA
ACCAATGCTC AGGGTAACTT CTTTGTCGGT AATTTGCCAG AGGGTGTTTA CATAGTTGAG
GTCGTTCCCA AAGACTTACC CATAGAACTT ACCCCCCTGA AAACTACCAC AATTGCCGAG
GTTGCGGGTG CGGCGGTAAC TAAGTTGAGT TTCCCTATGA GGGTTGAATA TGGCATTGCT
GGACGCATTA CAGATAGTGC AGGTCTGCCC GTACCGGGTT TAGCGGTAGA ACTTGTTAAT
GCTGAAGGTA AAAAAGTTGG AACAGGCGCA ACTGACGAAT TTGGTCTTTA TCGTGTAGAT
GGTCTTCCGG CTGGTCAATA CACATTACAG GTTCCCAATC AAAGCAACAT CAATCGTAGC
AATAGCCTGC CCAAACGAGC TATAACTATT GAGAACGATT TTGCCTACGA CCAAAATCTG
CAATTACCCA TTTCCGCAGC CACTAAAGAT GCACAGGAAG CACCAAAGTT ACCTAATCCT
TAA
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| Protein sequence | MFYDRPPISP PPITPHSLVS SIPTPQDNDH SQTADTFKYA IATPSELETF PNEFSTGVSP
QLFTTEHFSE ELITQHIVSE LPVGNTSNNN VTNIPGISTV DNIKQAPKAE SSPPNLGKPE
KDNGVTAPVN TTDTITFTET SSSGIETLLL GVIINRREVG SLDVIRRGNT LLVPLENFAQ
LTGLTITTTD DTTEIKTPLG AVKLASSELE IIQGITHISD SLLQEKLNTT IELRSLEAAL
IVGLPWLSGS REARNAAIDL EPEVKAPLSG LSSFRQELNV VNDSGGTRFQ SYSLLGGRLA
GGTWRIRLNN NFENSPNLAE YFFYKRNGRF LYQLGRQQIS VHPLLNGQIL TGAQFGYTNL
PADRYRQSYS ANQLIPRSSR SVQTFRGEVP PASFVQLRVG SRIIAQQQVG FDGRYEFFDV
NLPAGQNNLI EVLVYDRNNF SVPIEIRSVR LNTSDLLLPP GGNVQLLGLG FSGNLAQNAF
SDDYNTSDSG SLVGFYQFRQ GLSDNFTVEA GLQAIPNTFQ TQLGAIWRIA NPVILSGSVG
TSFGKLAYNA DLDVQLGGLD INANSQLFPE GYRSDNGSRE RYNHSLEVGY RFNSNLRLGV
LARSRKSDSN STEYIAPTFY FRPSNSLYFT GRPDTEGQYL FYSAYQPNAL TRLSFSSFGD
NYATDFSYKL NNNYQLSLGS DFGGNLPARY LATVNYYPRN IRGFSWRLGL AYRDGDVGPI
VGASTQLIPG LFARVEYQAI PSRARSNFGG WGDDRLTISL VSDLSFSDGR ISPGNFNSFG
KDKGAISGRI FVEGSKESFD LGESSVRVTD KYGKIIGGAR TNAQGNFFVG NLPEGVYIVE
VVPKDLPIEL TPLKTTTIAE VAGAAVTKLS FPMRVEYGIA GRITDSAGLP VPGLAVELVN
AEGKKVGTGA TDEFGLYRVD GLPAGQYTLQ VPNQSNINRS NSLPKRAITI ENDFAYDQNL
QLPISAATKD AQEAPKLPNP
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