| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3150 |
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| Symbol | lysS |
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| ID | 3680784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 3912207 |
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| End bp | 3913892 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637718499 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_323653 |
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| Protein GI | 75909357 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000153086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGAAG AAGATATCCG TGCCGCTAGG CTGGAGAAAG TAGAACAACT CAAGCAGCTA
GGAACTAACC CCTACGCTTA CCGTTGGGAG TCTACCCATC ACGCCGCCCA ATTGCAAGAA
AAATTTGCTG ATTTAACCAG TGGTGAAGAA GTCGATACAG AAGTTGCCAT TGCCGGACGC
ATTATGGCGC GTCGCGTTTT CGGTAAATTG GCTTTCTTCA CCTTGGAAGA TGAAACAGGC
ACTATTCAGC TTTATTTAGA GAAAAATCGT ATCCAAGAAA GCATGGCAGA AACTGATGCC
GATGCTTTTA ATCATCTCAA ACAACTCACA GATGTAGGAG ATATTCTGGG AGCCAAGGGA
ACCATAAAAC GGACTGAAAA GGGCGAGTTA TCGATTTACG TCAAAGAATA TACCATCCTC
ACCAAATCCC TACTGCCGCT ACCCGACAAG TGGCATGGGT TAACGGATGT TGCCAAGCGC
TACCGTCAAC GCTACGTTGA TTTAATTGTT AACCCCGAAG TCCGCCAAAC TTTCCGCCGT
CGCGCCCAAA TTACGGCTGG GATTCGCCGC TATTTGGAAC AAAGGGATTT TCTAGAGATT
GAAACCCCAG TTTTGCAAAG TGAAACTGGT GGTGCTGATG CGCGTCCCTT CATCACTTAC
CACAACACCT TAGAAATGGA GTTGTATCTG CGGATTGCCA CAGAACTCCA CCTCAAACGG
TTGATTGTCG GTGGTTTTGA AAAAGTATTT GAGTTGGGGC GCGTTTTCCG CAATGAGGGA
ATTTCTACCA GACACAACCC TGAATTTACC TCAATTGAAA TTTACCAAGC CTACGCCGAC
TACAACGATA TGATGGCGCT AACAGAAGGT ATTATCACCA CTGTTGCCCA AGATGTACTC
GGTACGCTGC AAATTACCTA CCAAGGCGAA ACGGTAGATT TGACACCACC TTGGCGACGG
GTGACAATGC ACGATTTAGT GAAAGAATAT ACGGGCTTGG ATTTCCATTC TTTCCAAACA
CTAGAAGAAG CGAAATCAGC AAGTAAAAAT GCTGGAATTC CTGGTGTAGA TGAAGCCCAA
ACTATAGGAA AAATCCTGAA TTTAGCATTT GAAGAAAAGG TAGAAGCTAA CTTAATTCAG
CCGACCTTTG TCATTGATTA TCCTGTAGAA ATTTCGCCAT TAGCTAAACC TCACCGTTCT
CAACCTGGGT TAGTAGAAAG ATTTGAATTA TTCATAGTCG GGCGGGAGAC TGCGAATAGT
TTCTCAGAAT TAACAGACCC CATCGACCAA AGAGAACGTT TGGAAGCCCA AGCAGCCAAA
AAAGCCGCCG GTGACTTAGA AGCCCAAGGT GTAGATGAAG ATTTCTTAAC TGCGTTGGAA
TATGGTATGC CACCCACAGG CGGTTTAGGT ATTGGGATTG ATCGGTTAGT CATGTTATTA
ACTGATTCTG CCAGCATTCG AGATGTAATT GCTTTCCCTC TACTCAAACC CGAAGGCAGC
TTTATTAAGG AATATCGCTA TGAGTCAACA ACTCAAACAC TGACTATGGA GTTTGATAGT
GGAAGTGTTT ACGAATATTT CAAAGTACCG CTTACTGTCA AGGAAGAATT AGATAATGCA
CCGTCTAAGG GTCAATATTT CCATAAGTTT ATTAAAGGGA AATTCAAGTA TGAACAATTG
AGTTGA
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| Protein sequence | MSEEDIRAAR LEKVEQLKQL GTNPYAYRWE STHHAAQLQE KFADLTSGEE VDTEVAIAGR
IMARRVFGKL AFFTLEDETG TIQLYLEKNR IQESMAETDA DAFNHLKQLT DVGDILGAKG
TIKRTEKGEL SIYVKEYTIL TKSLLPLPDK WHGLTDVAKR YRQRYVDLIV NPEVRQTFRR
RAQITAGIRR YLEQRDFLEI ETPVLQSETG GADARPFITY HNTLEMELYL RIATELHLKR
LIVGGFEKVF ELGRVFRNEG ISTRHNPEFT SIEIYQAYAD YNDMMALTEG IITTVAQDVL
GTLQITYQGE TVDLTPPWRR VTMHDLVKEY TGLDFHSFQT LEEAKSASKN AGIPGVDEAQ
TIGKILNLAF EEKVEANLIQ PTFVIDYPVE ISPLAKPHRS QPGLVERFEL FIVGRETANS
FSELTDPIDQ RERLEAQAAK KAAGDLEAQG VDEDFLTALE YGMPPTGGLG IGIDRLVMLL
TDSASIRDVI AFPLLKPEGS FIKEYRYEST TQTLTMEFDS GSVYEYFKVP LTVKEELDNA
PSKGQYFHKF IKGKFKYEQL S
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