| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3138 |
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| Symbol | |
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| ID | 3680772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 3900840 |
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| End bp | 3902489 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637718487 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_323641 |
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| Protein GI | 75909345 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTTTA CAGAGGTTCT ACACCCGTTG TCAGATTTTA TTGAATATGA TTTGACCGAT
GATGACTTAT CAGCTAACTA TTGGTATGAA GGGTATTGTC TGCAATCTGG TGATTTATTA
AGGCTGCCTC GTACTGCTTT AGTAGAGACG ATCGCTCATA GTTTAATGCA ATACCTTGCT
AAGGATGAAC GTTATTCCCG TGAAGGTAAA ATGTATGGCA TATTGCTAGT TGAAATACCC
ACGGGTGAAA GACGAGTACT TAAAGCTTTC TCTGGGTCGC TAAACGGACA AAATGTATTT
GATGGCTGGG TTCCACCAAT TCCGGGAAGA GAACAAGTTG CTATACAAGA GGAGCATACT
TTAGCTGAGT TAGATGCTAT TAAGCAGGAA TTGATTACCC TCAAGCAACT ACCACAAAGA
CAAGAGTACG AAACTCTTTC TAGAGAGTTT GAGCAGCAGT TGCAAGCAAT GAGCGATCGC
CATCGTTATC GCAAATCTCA ACGACAACAA CAACGTCAGC TAATAGACGA AACTATTTCA
CCAGCAACCC TCACTACTAC TTTAGAACAG CTTGATGAAG AAAGTCGTCA GGATGGAATT
GAACGACGGC GACTCAAGCA AGAACGAGAC ACAGTTCTGC AACCATTACA AGAAGCGATC
GCCTCAGCAA ATATTAAAAT ACAACACCTC AAGCAAAAGC GGAAAGCCCT ATCTCGGCAA
TTACAGGTGC AAATGCACGC TGCTTACTCC CTGATGAATT TTTTAGGGCA ATCTGTATCA
TTACAGCAAT TGATGCCGAA TGGCTTACCT ACAGGAACGG GAGACTGTTG TGCGCCAAAA
CTCTTACACT ATGCAGCCAC GCATGGACTG AAACCTTTAG CAATGGCTGA ATTTTGGTGG
GGTTCATCCT GTCAAGATAA AATTCAGGGT GAGTTTTATG GCGCTTGCAT GGAACGTTGT
CAGCCGTTGA TAGGATTTTT GTTGTCGGGT TTGAAACCTG ACTCAAACTT TGACAAAGAA
CAAATTAATG TGATTTATGA GGACGAATGG CTGATTGCGG TGAACAAACC TGCGGGGTTG
TTATCAGTTC CTGGTCGTTA TTTTGATACC CAAGATAGCG TTCTTAGCCG TTTGCGCCGT
TTGTTAACTC AGGAAACAAT GCTTGCTGCT GTGCATCGCT TAGATCAAGA TACCTCTGGT
ATTCTCTTAC TGGCAAGAGA CAGGCAAACT TATCGTCAAC TTAGCCAGCA GTTTCAACAG
CGACAAGTTC ATAAGGTTTA TGAAGCCATA CTTGCCGGCG TTGTCAGCAC AGAGACTGGG
ATAATTGATT TACCATTGTG GGGAGATCCA GAGAATCGAC CTTATCAGCA AGTTGATTGG
CAACGTGGTA AACCTAGCGT GACAAACTTT CGGGCGATCG CCAGGGAAGG AGATTACACC
CGCGTAGAAT TTGTACCACT CACCGGACGC ACCCATCAAT TAAGAGTTCA TGCGTCAGAT
GTGCAAGGAT TGGGGGTGGT AATTTTGGGC GATCGCTTTT ATGGTTGCAC TGCTAAAGCA
AATCGATTAC ATTTGCACGC TAGAGAACTC TGCTTTCTGC ATCCACACTC AGGAAAAATA
ATTCACTTAC AAGTAAAGAC ACCATTTTAA
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| Protein sequence | MPFTEVLHPL SDFIEYDLTD DDLSANYWYE GYCLQSGDLL RLPRTALVET IAHSLMQYLA
KDERYSREGK MYGILLVEIP TGERRVLKAF SGSLNGQNVF DGWVPPIPGR EQVAIQEEHT
LAELDAIKQE LITLKQLPQR QEYETLSREF EQQLQAMSDR HRYRKSQRQQ QRQLIDETIS
PATLTTTLEQ LDEESRQDGI ERRRLKQERD TVLQPLQEAI ASANIKIQHL KQKRKALSRQ
LQVQMHAAYS LMNFLGQSVS LQQLMPNGLP TGTGDCCAPK LLHYAATHGL KPLAMAEFWW
GSSCQDKIQG EFYGACMERC QPLIGFLLSG LKPDSNFDKE QINVIYEDEW LIAVNKPAGL
LSVPGRYFDT QDSVLSRLRR LLTQETMLAA VHRLDQDTSG ILLLARDRQT YRQLSQQFQQ
RQVHKVYEAI LAGVVSTETG IIDLPLWGDP ENRPYQQVDW QRGKPSVTNF RAIAREGDYT
RVEFVPLTGR THQLRVHASD VQGLGVVILG DRFYGCTAKA NRLHLHAREL CFLHPHSGKI
IHLQVKTPF
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