Gene Ava_3132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3132 
Symbol 
ID3680800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3888835 
End bp3889146 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content46% 
IMG OID637718476 
ProductRNA-binding region RNP-1 
Protein accessionYP_323635 
Protein GI75909339 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTTT ATGTAGGCAA TCTTTCTTAC GACGTTACAG AAGATAGTTT GAATGCGGTT 
TTTGCAGAAT ATGGTTCTGT AAAACGTGTT CAGCTACCTA CTGATCGTGA AACAGGCCGG
ATGCGCGGCT TTGGTTTTGT GGAAATGGGT TCAGATGCTG AAGAAACAGC AGCCATTGAA
GCACTTGATG GTGCTGAGTG GATGGGACGT GACCTCAAAG TGAACAAGGC TAAACCAAAA
GAAGATAGAG GTTCTTTTGG TGGTGGTAAT CGTGGTGGCT ATGGTGGCGG CGGTGGACGC
AATCGCTACT AA
 
Protein sequence
MSVYVGNLSY DVTEDSLNAV FAEYGSVKRV QLPTDRETGR MRGFGFVEMG SDAEETAAIE 
ALDGAEWMGR DLKVNKAKPK EDRGSFGGGN RGGYGGGGGR NRY