Gene Ava_3118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3118 
SymbolargJ 
ID3680864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3873185 
End bp3874426 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content48% 
IMG OID637718462 
Productbifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 
Protein accessionYP_323621 
Protein GI75909325 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1364] N-acetylglutamate synthase (N-acetylornithine aminotransferase) 
TIGRFAM ID[TIGR00120] glutamate N-acetyltransferase/amino-acid acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACT GGCAGGAAAT TACTGGTGGA ATTACAGCAC CAAAAGGTTA TCGGGCGGCG 
GGAATTACAG CAGGACTCAA ACCTTCGGGG TTGCCAGATT TAGCTTTGAT AGTATCAGAC
GTAGAAGCGA TCGCAGCTGG TGTATTCACA ACCAGTCAAG TAAAAGCTGC TTGTGTAGAC
TACTGTCGCC AACGTTTACA AGCCAAGCAA AGCGCCCGCG CCATCCTCTG CAATGCTGGA
CAAGCCAACG CCGCTACAGG TAGTCAAGGT ATTAAGGATG CAGAAGAAAG CGCCGATTTG
TTAGCAAAAG AGTTAAATAT TTCCCCCGAA TCAATTCTGT TGGCTTCCAC TGGGGTAATT
GGTCAACGAA TTAAAATGGA TGCCTTACGC AACGGTATTC CTAAACTTGT AGCATCCCTT
ACTGATGCAG GCTCAGATGC AGCCGCCGGG GCAATTATCA CTACAGATTT GGTCACAAAA
TCTATTGCCT TAGAAACCAC TATAGGAGAT CGCCCAGTCC GCATTGGTGG TATCGCCAAA
GGTTCAGGGA TGATTCATCC CAACATGGCG ACAATGTTGG CTTTTGTTAC CTGTGATGCC
GCAGTTTCCC CTCATCTTTG GCAACAGATG TTAACTAGGG CAGCCGATAG AAGCTTCAAT
TCCATTACAG TAGATGGAGA TACCAGCACC AATGATAGTT TAATTGCCCT AGCCAATGGA
CAATCTCGCA CCCCAGCAAT TACTGAAGTA GGTGCAGAAT CAGAAAAATT AGAGGCCATG
CTAACAGCAG TATGCCAGCA TTTAGCCAAG GCGATCACTC GTGATGGTGA AGGTGCAACT
TGTCTTATAG AAGTGCAAGT TACAGGCGCG CATGATGAAC AAGCAGCTAG ACAAATCGCC
AAAACTATTG CTGGTTCATC ATTAGTGAAG TCTGCAATCT TCGGTCGTGA CCCAAATTGG
GGGCGCATCG CCGCCGCCGC CGGACGCGCA GGTGTTCCCT TCGAGCAGGA AAACCTGCAA
ATTCAGCTAG GAGATTTTTT ACTCTTAGAC AATGGTCAAC CCCTCCCCTT TGACCGCGCC
GCCGCCAGTG CGTATTTAAA ACAAGCTGCT ACAGGTGCTT ATCTTCAACA AGATACCGTC
TTAATTTCCG TCAATGTGGG TAATGGTCAC GGCACTGGCA AAGCTTGGGG ATGCGATTTA
AGTTACGACT ACGTGAAGAT TAATGCTGAG TATACAACTT AG
 
Protein sequence
MADWQEITGG ITAPKGYRAA GITAGLKPSG LPDLALIVSD VEAIAAGVFT TSQVKAACVD 
YCRQRLQAKQ SARAILCNAG QANAATGSQG IKDAEESADL LAKELNISPE SILLASTGVI
GQRIKMDALR NGIPKLVASL TDAGSDAAAG AIITTDLVTK SIALETTIGD RPVRIGGIAK
GSGMIHPNMA TMLAFVTCDA AVSPHLWQQM LTRAADRSFN SITVDGDTST NDSLIALANG
QSRTPAITEV GAESEKLEAM LTAVCQHLAK AITRDGEGAT CLIEVQVTGA HDEQAARQIA
KTIAGSSLVK SAIFGRDPNW GRIAAAAGRA GVPFEQENLQ IQLGDFLLLD NGQPLPFDRA
AASAYLKQAA TGAYLQQDTV LISVNVGNGH GTGKAWGCDL SYDYVKINAE YTT