Gene Ava_3117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3117 
Symbol 
ID3680863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3871399 
End bp3872490 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content49% 
IMG OID637718461 
Productthreonine synthase 
Protein accessionYP_323620 
Protein GI75909324 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTTTGA GCTTGTCTGT TGCTAAATCT CATCGCCAAC CCTGGCCCGG ACTGATAGAA 
GCCTATCGTG AGTACTTACC TGTCAGTGAA CAAACGCCAG TTGTAACTTT GTTGGAAGGT
AACACTCCTT TAATTCCGGT GCCAGCGATC GCAGAACGTA TCGGTAGACA AGTAAGTGTG
TTCGTGAAAT ACGATGGTCT CAACCCCACT GGCAGCTTCA AGGACAGGGG GATGACTATG
GCGATTTCCA AAGCGAAGGA AGCTGGAGCC AAAGCGGTTA TTTGTGCGAG TACAGGCAAT
ACCTCAGCCG CAGCCGCAGC CTATGCCCGT CGTGGCGGAA TGAAGGCTTT TGTACTGATT
CCCGATGGTT ATGTGGCTTT GGGTAAGCTG GCGCAAGCAC TTCTTTATGG TGCAGAAGTA
TTGGCAATTA AAGGCAACTT TGATAGAGCC TTAGAAATTG TCCGCGAGAT GGCGGAAACC
TATCCCATCA CCCTGGTGAA TTCAGTCAAT CCCTATCGCT TGGAAGGTCA AAAAACAGGA
GCCTTTGAGG TTGTCGATGC TTTGGGTAAT GCCCCAGACT GGTTGTGCAT CCCAGTTGGT
AACGCGGGAA ATATCACAGC ATATTGGATG GGTTTTTGTC AATATCATCA AGCAGGGAAA
TGCGATCGCC TACCCCAGAT GATGGGCTTT CAAGCCGCAG GTGCAGCTCC CTTGGTAAAT
GGCCAGCCTG TATCCCATCC CGAAACCATC GCTACCGCCA TTCGCATCGG TAACCCCGCG
AGTTGGGATA AAGCGATCGC CGCCCAATCA GCCAGTCAAG GAAGTTTTAA CGCCGTTACT
GATGAAGAAA TTCTCGACGC ATACCGATTA TTGGCATCAT CAGAAGGCAT TTTCTGCGAA
CCCGCCAGCG CTGCTTCCGT CGCCGGCTTA TTAAAAGTCA AAGACCAAGT ACCCACAGGC
GCAACAGTAG TATGTGTCCT CACAGGTAAC GGTCTTAAAG ACCCGGACAC AGCAATTAAA
CACAGTCACA GCCAATTTAA ACAAGGCCTT GAGGCAGATT TAAAAGATGT AGCCAAGGCA
ATGGGATTTT AA
 
Protein sequence
MTLSLSVAKS HRQPWPGLIE AYREYLPVSE QTPVVTLLEG NTPLIPVPAI AERIGRQVSV 
FVKYDGLNPT GSFKDRGMTM AISKAKEAGA KAVICASTGN TSAAAAAYAR RGGMKAFVLI
PDGYVALGKL AQALLYGAEV LAIKGNFDRA LEIVREMAET YPITLVNSVN PYRLEGQKTG
AFEVVDALGN APDWLCIPVG NAGNITAYWM GFCQYHQAGK CDRLPQMMGF QAAGAAPLVN
GQPVSHPETI ATAIRIGNPA SWDKAIAAQS ASQGSFNAVT DEEILDAYRL LASSEGIFCE
PASAASVAGL LKVKDQVPTG ATVVCVLTGN GLKDPDTAIK HSHSQFKQGL EADLKDVAKA
MGF