Gene Ava_3104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3104 
Symbol 
ID3680850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3857430 
End bp3859154 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content36% 
IMG OID637718448 
Productankyrin 
Protein accessionYP_323607 
Protein GI75909311 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.519115 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTC ACGATTTTGC AATCCAAGGA AATATTGCAG GTGTAAGACA ACAATTAGCT 
AAGGGAGTTG ATATCAATTG CCTCGATGAA TCATCACAAA CACTATTAAT GTGCGCCGTA
AGTAGCCCTA ATGCGAGTTT GGAGATGGTG CAATTTTTAG TAGAAATAGG TGCAGATATT
AACGCAATTG GAGGAACAAC TTTCAACCGT ACCGTGCTGG AACTTGCCAT CCAATCGGGA
AATATTGAGA TAATTAAATA TCTTTTAGAA GTAGGAGTCA ATATTCACGC TCCAGGTGCA
GATAGCTGTG ATATTTTAAT TGATGCGATA TACAGCCAAA ATATTCCATC AGGTGAAAAT
TTAATCTCGA TTCTTCGTTT ATTAATTGCT AAAGGTGCAG ATTTAGGAAA GAATCAATAT
GGAAAATCTG CGTTGACTGC TGCTGCTTCG GAATGCCGCT TTGATGTGGT GGAGTTTTTA
TTAGCAGTAG GTGCAGACAG AGAACAATTG CAATGGACGG AATTAATGTA TGCAATTGTA
TTTGGCAGCG TTGAAGAAGT AAAGCAATTA ATCGATGCGG GTGCAGATTT AGAAGTGTGG
GATTTCTGTA ATCGCACACC GTGGATTTTG AGTGTGCAAA TAGGTGAAAT AGAAAAAGCG
CAATTACTTT TACCATCAGC AGCTGATCGA AATAAATATC TCACTTCTGA AGAACCTGAA
TTAATGTATG CCATCAAAAA TAATCATACT GAACTTCTCA AATGGCTGAT TGCACAAGGT
TTTGATGTAG AAGCTACTGA CCATTATGGT ACAACTCCCT TAATTGCCGC AGTTGAACGA
GGTGCGACTG ATTGTGTGAG AATATTATTG GAAGCTGGAG CAGATCCTAG TAAAAGTGGA
AATTACGGTC AAAAGCCGAT TAATTGTGTA AGTAATTTGG AAATTCTCAA AATGCTCATC
GATGCGGGTG AAGATTTAAG CGACATCCAT GATGATATGC AGCAGTTATT AACGGGGTTG
AGCAACGATA AAGAGATTTC AAATATTGAT CAAGAACAAT ATTTAAGTGG AAAATATCGG
CGATTTGGAA AAGCGAATCC AGAAATAATG GCAGTCGAAT TTTGGCACGC AATGGTCAGA
AGCATTGCAA CAGCGTGGAC TGCACGCAAT ACTTTTAACG ATGCTGATAA TGCTTTTGGA
GATAAAGCAG TCTGGTGTTT TCAAAGACTT GGTCGGACAA TTACTCAGTT ACCTGATGGG
AGAATTATTC AAATAGCAGG GGAACATGAA GATTACTATG ACCCTGATTT TTGTATATAT
AATGATGTCG TAGTTTTCCA AAATGATGGT AAATTTACAA TTTTTGGTTA TCCCCAAGAA
ATTTTTCCTC CTACTGATTT TCATTCAGCA ACTTTAGTTG GGGAATATAT TTATATAATT
GGCAATTTGG GGTATGACAA TCAAGTGATT TATGATGAAA CACCTGTTTA TCGGCTAAAT
TGTCACACAT TTAAAATAGA AAAAATTGAA ACAAATGGAG AAAAACCTGG ATGGATTAGC
CGACATAAGG CTTGTTATAA AGAGCCATTT CATATATATA TTACTGGTGG TAAGCGCTTT
TCTAAAGTAG GAGATAAAAC AGATTATATA GACAATAAAA ACTCCTATAT ACTCGATTTG
AAAAATATGT ATTGGAGTCG GAAATTAGAG CAGTTTTCAA ACTAA
 
Protein sequence
MKIHDFAIQG NIAGVRQQLA KGVDINCLDE SSQTLLMCAV SSPNASLEMV QFLVEIGADI 
NAIGGTTFNR TVLELAIQSG NIEIIKYLLE VGVNIHAPGA DSCDILIDAI YSQNIPSGEN
LISILRLLIA KGADLGKNQY GKSALTAAAS ECRFDVVEFL LAVGADREQL QWTELMYAIV
FGSVEEVKQL IDAGADLEVW DFCNRTPWIL SVQIGEIEKA QLLLPSAADR NKYLTSEEPE
LMYAIKNNHT ELLKWLIAQG FDVEATDHYG TTPLIAAVER GATDCVRILL EAGADPSKSG
NYGQKPINCV SNLEILKMLI DAGEDLSDIH DDMQQLLTGL SNDKEISNID QEQYLSGKYR
RFGKANPEIM AVEFWHAMVR SIATAWTARN TFNDADNAFG DKAVWCFQRL GRTITQLPDG
RIIQIAGEHE DYYDPDFCIY NDVVVFQNDG KFTIFGYPQE IFPPTDFHSA TLVGEYIYII
GNLGYDNQVI YDETPVYRLN CHTFKIEKIE TNGEKPGWIS RHKACYKEPF HIYITGGKRF
SKVGDKTDYI DNKNSYILDL KNMYWSRKLE QFSN