Gene Ava_3094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3094 
Symbol 
ID3681016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3845802 
End bp3847790 
Gene Length1989 bp 
Protein Length662 aa 
Translation table11 
GC content42% 
IMG OID637718439 
Productvirulence-associated E 
Protein accessionYP_323598 
Protein GI75909302 
COG category[R] General function prediction only 
COG ID[COG5545] Predicted P-loop ATPase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000820429 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.712426 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACTA CATTCAGAGT AACACAACAG TTTTCATCTG CCAACAACTT TCTTAAATTG 
GTAGGTGAAC CACCTTACTT GTTCCAAACG TTCGATGATA GCAAACACAA AGATAGAAGT
TTAACCCGTC AATTCTATGG CTCACTTGAT GAGCATTGGG ATAAGCTTGT CGAGTTTAAT
AATAGGGGCG CGGGTATCTT TGTAACTGTT AATATGACCA GTGGAAACAA ACGTAAAGCT
GAGAATATAA CTGCTGTTCG TGCGTTATTC ATCGACTGTG ACAACGAGTT ACCTAACGAG
TTTCACCTAA CACCTACCGT CGTTGTTAAT AGCAGCAACA ACAAAGGTCA TGCTTATTGG
TTATTGGATA AAGCATCTAA TGATGTTGCT AACTTCACCC AACATCAGCA ACAACTTATC
AAACATTATG GTAGTGACCC AGCCGTTAAA GACTTACCTA GAATAATGAG GTTGCCAGGG
TTTAACCACA TGAAAGGTGA GCCTACATTG GTCACATTCA TACAAACTGG AAAGCCTTAT
GAGTCGATGG CATCTATCAC TGATGGTTTA GTTTCTAATG ACTTTATACA ACAACTAGAA
AGCTTTGCTA ACAAGGTTAA AAATGCACCG GAAGGTACGA GAAATGACAC ATTAAACACA
GCAAAATATA CACTAGCTGG AGCATACCCA AACAAACTAC CAGAGATAGA CCAACGTCTG
ACTGAAGTTG CGTTAGAGAA TGGTTTAACC ATCGGTGAAA TAAAACCAAC TTTAAACAGT
GGTGACGTAG GCGCACAGCG TCCTATTAAA CTTGTAGGTA GTGGTAAGAG AAGTAAGAGC
AACATGGTAA GGGAAGTGTT AGAGCAATTC TTCGGTGACG AGTTGCAATG GGATGAGATG
AAGAATAAGC TTAGGTTTCG TGGGCAGAAT GTCACTGCTG AAAAACTACA CGACATTTGT
GAGCGTGAGT TAGACATTGA CCTACCATTT GAAAGCTTTA AACGTATGGC ATCTGTTAAA
GCAAGCGACA ACCCGTATCA TGCTGTTCGT GAATATCTCC AAAGCTTACC CACAGTTGAT
AACCCTGAGC CTGTCTTGTC TGCTCTCTAT CAAGCAATGG GTATCACCAA CAAACTACAT
AGGCTTTACA TTCGACGTTG GCTTATTGCT GCTGTTGGTC GTGCCATGAC CCCAGGTTGT
AAGGCTGACT GTGCATTGGT GTTGCAAGGT AAACAAGGTA TAGGTAAGAC TACTTTCTTT
AATAGTTTGT TTGGTGAGTT TTTCCAAACA CTAGGGGAGC ATAAGAGTGA CGTAGACCAA
CTGCTATCGA TGGCTCGTAG TTGGTGTATC GAGTGGGGTG AAATAGAGAA TGCGTTTAGT
CGCAAAGCTG TTTCAGCCAT TAAGAGTTTT ATGTCCACAA CTCACGACGT TTATAGGCGA
CCTTATGCGG CTGAACCTGA CAACTACCCA CGTCATTTTA TTATCTGTGG CACAACCAAC
CAGTCTGAGT TTCTAACTGA CTCGACAGGA AACCGTCGTT TCTGGGTTGT TAATGCTGAG
AACCGTATCG ATACTGCGGC TGTTAAAGAG ATGCGTGATG ATGTCTGGTC AGCCGTTCTT
AAGTTGTACC TCGACGGTGA GCCAAGCTTC CTTAATGAAA CTGAGGTAGT AGAGTCAGCA
GAAGACACCA GCCAGTATGA ACAAACTCAC CCTTGGTTTG CAGAAGTTTC AGCGTACATG
ACCCACCACA ACCCATGTAC ATTAGCCGAC ATTATGAAGA ATGCTCTAGG GTTTGAAACG
AGCCGACTAA ATGACAAGAA GGCACAAAGG GAAGTGAGCG ACATTCTAGA TAAACTGGGG
TGTACCAAAA AACAACAACG GTTAAACGGT GTTAAAGCTA TTTATTGGCA CAAACCTACC
CTTGATAATG TCACAACTGA TGATGTCAGA GTGACAACAA AGGACATCCC AACGTCTGAA
TACTTCTAA
 
Protein sequence
MSTTFRVTQQ FSSANNFLKL VGEPPYLFQT FDDSKHKDRS LTRQFYGSLD EHWDKLVEFN 
NRGAGIFVTV NMTSGNKRKA ENITAVRALF IDCDNELPNE FHLTPTVVVN SSNNKGHAYW
LLDKASNDVA NFTQHQQQLI KHYGSDPAVK DLPRIMRLPG FNHMKGEPTL VTFIQTGKPY
ESMASITDGL VSNDFIQQLE SFANKVKNAP EGTRNDTLNT AKYTLAGAYP NKLPEIDQRL
TEVALENGLT IGEIKPTLNS GDVGAQRPIK LVGSGKRSKS NMVREVLEQF FGDELQWDEM
KNKLRFRGQN VTAEKLHDIC ERELDIDLPF ESFKRMASVK ASDNPYHAVR EYLQSLPTVD
NPEPVLSALY QAMGITNKLH RLYIRRWLIA AVGRAMTPGC KADCALVLQG KQGIGKTTFF
NSLFGEFFQT LGEHKSDVDQ LLSMARSWCI EWGEIENAFS RKAVSAIKSF MSTTHDVYRR
PYAAEPDNYP RHFIICGTTN QSEFLTDSTG NRRFWVVNAE NRIDTAAVKE MRDDVWSAVL
KLYLDGEPSF LNETEVVESA EDTSQYEQTH PWFAEVSAYM THHNPCTLAD IMKNALGFET
SRLNDKKAQR EVSDILDKLG CTKKQQRLNG VKAIYWHKPT LDNVTTDDVR VTTKDIPTSE
YF