Gene Ava_3083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3083 
Symbol 
ID3681063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3830888 
End bp3831475 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content38% 
IMG OID637718428 
Producthypothetical protein 
Protein accessionYP_323587 
Protein GI75909291 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.439197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATCG CTCAAGCTAA ACGCTTCACC CTCGATGAGT ACCAAAAACT CACGGAATTG 
GGCTTTTTCC ACGAAGATGA CCACATTGAG TTAATTAACG GAGAGCTTAT ACAAATGGTA
TCCAAGGGTA AAGCCCATGA GACTTGCTTA CGCAAATTAT TACGAGAATT ACCTAAATTA
GTCGGTGATA GGGCTACTTT ACAATCCCAA GCCCCAATTA CTTTACCGCC TAACAGCGAA
CCAGAACCGG ATTTTGCCAT TGTGAAAAAC CGAGACGACA ATTATCTATC TGCTCACCCT
AGTCCTAGTG ATGTGTTGCT AGTGATAGAA GTTGCTGATT CTTCCTTGAG TTATGACCAA
GATATCAAAA TACCTCTCTA TGCTAAAGCA GGTATTGTGG ATTATTGGAT ATTCAATTTA
TTTGATAATT ATTTGGAATC TTACAGTCAA CATTATCAAG ACAGCCAGGG AAAATACGGT
TATCTTAATA AGAGAATTGT CTTACCTAAT CAGGTAATAT CCCTACCATG TTTCCCCCAT
TTATCTCTGG ATGTAAGTAG AATATTGCCT ATAAAACTAA ATCTTTAA
 
Protein sequence
MSIAQAKRFT LDEYQKLTEL GFFHEDDHIE LINGELIQMV SKGKAHETCL RKLLRELPKL 
VGDRATLQSQ APITLPPNSE PEPDFAIVKN RDDNYLSAHP SPSDVLLVIE VADSSLSYDQ
DIKIPLYAKA GIVDYWIFNL FDNYLESYSQ HYQDSQGKYG YLNKRIVLPN QVISLPCFPH
LSLDVSRILP IKLNL