| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3082 |
|---|
| Symbol | |
|---|
| ID | 3681062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 3829694 |
|---|
| End bp | 3830479 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637718427 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_323586 |
|---|
| Protein GI | 75909290 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00288] conserved hypothetical protein TIGR00288 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.407546 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGATA TTCTTTCCAT CTCAAACAAA CAAAAAACCA AGAGCAAAAA TATAGTTGCG
CTTGCGTGTG ATTATCAGAA TGTTCCATTA ACACCAGATA CAGCTAAGTT ATTGCTGGAA
TTTGCTACAT CAAAAGGACG ACTAATTCAC AAAAATGTCT ATTACAATTC TAAATTTAAA
AACCAGGCTG ATGCAAAGCG CAATCTAGCC AACCTGAGTT TTAACTGGAT TGATGTTCCT
TGTCTTTTAA AGAATAGTGC TGATAATCAA TTGATAGTGG ATTGCCTACA AGTTAATAAC
AATCTATCTC CAGATATATT CATTATTGTC TCAGGTGATG GAGACTTTAC AACATTGATT
AATCCTTTAC AAAAACTTGG CAAACAAGTC ATTGTGATTG CTGAAGCAGG TAACGTAAAA
CAAAAACTGA AAGAGCTTGC TGATGAGTTT TACTTTATAG AGGAGTTAAG CCAGAAAATT
CAGCAAGAGA CTCAACATCA AAACACTCCG GTCAAATCTC CAATTGCTTA TAATGAAGCT
ATAAAGCATC TAATTGAGGC AATCAGGCTT GCATCAGTTC AAGGTACAGC CACAACCTTT
TCATCTATTG ACAAATTAAT GCGTCAGCGT TGTCATCAAT ATCAGGGATT TTCATCTATC
TGCAAAAATG ATGGCAAGAA ATTTAAAAAC TTTAGTCAAT TCGTTGATAC TACTGTCAAA
GATGGTAAAG TACAAAAGCG CAATGAAAAA TTGTTTTTAA TTGAGTTAGA CAGAATACCT
GCTTAA
|
|---|
| Protein sequence | MSDILSISNK QKTKSKNIVA LACDYQNVPL TPDTAKLLLE FATSKGRLIH KNVYYNSKFK
NQADAKRNLA NLSFNWIDVP CLLKNSADNQ LIVDCLQVNN NLSPDIFIIV SGDGDFTTLI
NPLQKLGKQV IVIAEAGNVK QKLKELADEF YFIEELSQKI QQETQHQNTP VKSPIAYNEA
IKHLIEAIRL ASVQGTATTF SSIDKLMRQR CHQYQGFSSI CKNDGKKFKN FSQFVDTTVK
DGKVQKRNEK LFLIELDRIP A
|
|---|
| |