Gene Ava_3075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3075 
Symbol 
ID3681055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3814354 
End bp3815184 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content35% 
IMG OID637718420 
Producturoporphyrinogen-III synthase 
Protein accessionYP_323579 
Protein GI75909283 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.968047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAACT TGCTAACTGC ATCTCACCAA TTGCCCTTAT ACGGAAAAAG GATTTTAGTA 
ACAGCGCCAA GAAACTACGC TTCTAGGTTG TCTGCACAAA TTATCTGCAA GGGTGGTTTA
CCGATTCTCA TGCCCACGAT AGAAACCTGC TATTTACCTA ACTTTTCTCA ATTAGATGCT
GTTATCAGCT GCATAAATGA ATTTGATTGG ATTGCATTTA CTAGTAGAAA CGGCATCATA
GCATTTTTTG AACGTCTACA TAATTTAGAT ATTTCTATAA ATAAATTGCA AAATTGTCAA
TTATGTGCAT TGGGGAAAGA TATAGATGTT TTATTATCTT TGTTTGGTAG AGTAGATTTA
ATTCCTGACG AATCTAGCCC GGCGGGGATT GTGGCTAAAT TTTCGCAAAT ACATGGAATT
AGTAGACAAA AAATCTTAGT TCCAGTGCCA GAAGTTATAG GCATACCTGA GCCTAATATT
GTGCCTAATT TTATCAAGGA TTTAGAAAAA TTGGGTATGC AGGTGATTCG TGTACCTACA
TACATAACTC AATCTTTAGA CAAAAATATT TACTCGGTGG AAATAAATTT AATTCAACAA
GGCTTAATTG ATGTGATTGC CTTTAGTAGT ACCGCAGAAA TCGAAAGTTT TTTAAAAATG
TTTAACTCTA AAAATGAGTT TCAGCATTGT GTTGTTGCTT GTTTTGGCCC TTATACAGCC
GCCAACGCCC AAAAGTTAGG TCTGGATGTT TCTCTTGTGT CAACAGACTT TAGTTCTTTT
GAAGGTTTCG TAGAAGCAAT AGTAAAATTT TATATTGATA GTCCAACGTA A
 
Protein sequence
MSNLLTASHQ LPLYGKRILV TAPRNYASRL SAQIICKGGL PILMPTIETC YLPNFSQLDA 
VISCINEFDW IAFTSRNGII AFFERLHNLD ISINKLQNCQ LCALGKDIDV LLSLFGRVDL
IPDESSPAGI VAKFSQIHGI SRQKILVPVP EVIGIPEPNI VPNFIKDLEK LGMQVIRVPT
YITQSLDKNI YSVEINLIQQ GLIDVIAFSS TAEIESFLKM FNSKNEFQHC VVACFGPYTA
ANAQKLGLDV SLVSTDFSSF EGFVEAIVKF YIDSPT