Gene Ava_3065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3065 
Symbol 
ID3681045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3801437 
End bp3802210 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content44% 
IMG OID637718410 
Producthypothetical protein 
Protein accessionYP_323569 
Protein GI75909273 
COG category[S] Function unknown 
COG ID[COG4241] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATTT TAGATTCTCT GCCAGATGAG CCAGAGGAAG AAACATCCCC TGAATCTCTA 
AATCCCCAAA ATCCACCATC AGATCAGCAA GAGCCACAGA AACATAATGC TCAGACCAAC
GGCGGAGAGC AACACAATTT ACTATCTCCC CAGTTGAAAG TTGATGCGCC CTTAAGGATG
GTAGAGACGG CTTTCTTAGC AAGCACCGCT AGCCTGATTT GGTTTATCAA TTTTTACTTT
CCCCTTGGTC CGGTGTTGCG GATATTTTTT CCTGTACCCA TTGCATTAGT TTATCTGCGT
TGGGGTAAAC GAGCAGCATG GATGGCGGCT GTTACTTCTG GTTTATTATT GTCTGTACTG
ATGGGGCCAG TCCGTAGTCT GTTGTTCGTC ATGCCTTTTG CGTTTATGGG TGTGCTGCTA
GGAGCAACAT GGTATCGTCG CGCTCCCTGG ATTGTTTCGA TCACACTGGG TACGCTGTTG
GGTACTTTAG GGGTCTTTTT TCGGTTGTGG TTGTTGTCTG TGTTGTCGGG AGAAGACCTG
TGGATTTATT TAATTACCCA AGTAACAGAA CTCATAGAGT GGATATTCTT GAAACTGGGA
TTATTAAATA GTCCTAGTGT ACTTTTGATC CAGTTTGGGG CAGTAGCATT GATTATCATC
AATAACTTTA TTTATCTGTT TGTTGTACAC TTGGCAGCGT GGCTACTCTT AGATCGCTTA
GGAAATCCCA TTCCCCGTCC ACCTCGTTGG GTACAAGTTC TTATGGATTA TTGA
 
Protein sequence
MSILDSLPDE PEEETSPESL NPQNPPSDQQ EPQKHNAQTN GGEQHNLLSP QLKVDAPLRM 
VETAFLASTA SLIWFINFYF PLGPVLRIFF PVPIALVYLR WGKRAAWMAA VTSGLLLSVL
MGPVRSLLFV MPFAFMGVLL GATWYRRAPW IVSITLGTLL GTLGVFFRLW LLSVLSGEDL
WIYLITQVTE LIEWIFLKLG LLNSPSVLLI QFGAVALIII NNFIYLFVVH LAAWLLLDRL
GNPIPRPPRW VQVLMDY