Gene Ava_3060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3060 
Symbol 
ID3681139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3796107 
End bp3796949 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content41% 
IMG OID637718405 
Producthypothetical protein 
Protein accessionYP_323564 
Protein GI75909268 
COG category[S] Function unknown 
COG ID[COG5464] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCATACG ATAACATCTG CCGCTATCTT ACATCCGAGT ACCCATTACC GTTTGTACAA 
TGGCTACTTA ACTGCAATGC AACAGATATC CAGGTTTTAC CTACTGAGTT GAGTCTAGAA
CCCATTCGCT CTGATGCTTT GTTCCAAGTA CCAGAACTCA ACGTCATTCT CCACCTGGAA
TTTCAAACTC TCCCCACCTC TAATCCACCT CTACCAGTAA GAATGCTTGA TTATTGGCTG
AGAATCTATC GTAAATATGA GTGTCCGATA GAACAGGTAG TCATCTTTTT AAGACCGACT
AATTCACCTA CTGTTTATAA CGATACCCTG GCTGTTGGCA AAACCAGACA TCAATTCAGA
ATCATCCGTT TATGGGAGCA AAACCCCGAA CCTCTGCTAA ATAATCCCGC ACTATTACCA
TTGGCAGTTT TAGCTCAAAC CAATAGCCCA GAAAACATTC TAGAACAAGT AGCAGCACAG
GTAGATAGAA TTGAAGAAAG CGAGGAACGC AAAAACATTG CCGCTTGTGT AGAATTACTG
GCTAGTATCA AGTTTGATAG ACAACTAATT CAACAGTATT TAACGGAGGA ACTTATGCGC
GAGTCACCGC TTTATCAAGA AATTTTGCAG GAAGGAAGAG AGCAAGGATT TAGACAAGGT
AAGTTAGAAA CTTTGACGCG CCAGCTAACA CGACGATTGG GTACAATTCC TGCGGATATA
CAGCAACAAA TCACGCTGCT ATCTATTGAT CAACTCGATG CTTTAAGTGA AGCATTATTA
GACTTCACTA ATACTTCAGA TTTGGCGAGT TGGTTACAAA CTGATGCGAG GAATTTTATT
TAG
 
Protein sequence
MAYDNICRYL TSEYPLPFVQ WLLNCNATDI QVLPTELSLE PIRSDALFQV PELNVILHLE 
FQTLPTSNPP LPVRMLDYWL RIYRKYECPI EQVVIFLRPT NSPTVYNDTL AVGKTRHQFR
IIRLWEQNPE PLLNNPALLP LAVLAQTNSP ENILEQVAAQ VDRIEESEER KNIAACVELL
ASIKFDRQLI QQYLTEELMR ESPLYQEILQ EGREQGFRQG KLETLTRQLT RRLGTIPADI
QQQITLLSID QLDALSEALL DFTNTSDLAS WLQTDARNFI