| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3005 |
|---|
| Symbol | |
|---|
| ID | 3681240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 3728812 |
|---|
| End bp | 3729450 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637718351 |
|---|
| Product | response regulator receiver domain-containing protein |
|---|
| Protein accession | YP_323510 |
|---|
| Protein GI | 75909214 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAGTA ACAAAATTTT AGTTATCGAT GACACTACCG TTGTCAGGGT AAAAGTACGT
GAAATGTTGC CCCCTGGCAA TTTTGAGGTA TTAGAAGCCA AGGACGGCTT GGAAGGGATA
AATCTCATCC GACAAGAAAA ACTCAGCTTG ATCATGTTGG ATTTCCTGCT GCCTAAATTA
AGTGGTTGGG AAGTATTCCA GCAAGTTCAA GCGCATCCTG AACTGAGAAA AATTCCCTTG
GTAATTATGT CTGGGAGGAA GGAAGAGGTG ACGGAAAAAA TCACTGAACC TTTCGAGTAT
TTTGAATTTT TGGGTAAACC TTTTGATCAG AAACAGCTCA TTAATGCGAT TAAGTCAGCA
ATGACTAAGG CTAAATTACC GCGCCAAGAA CCAGTAGGAG CAGTTGCTGC TAAGAATGGT
AATACAGCCA CTGCTACTAT GACACATGGC GCTGTAGCAA CAGTAGCTCC ACCTACAGTT
GCTACCACTA CTACAGTAGC AACGGCTGGA ATAGATGCAG ATGCGGCTGC TGAAATTCAA
GCACTTAATG ACAAAGTTGC TAAGATGCAG GCAGAAATTG AAGGTTTGAA GAAACAGCTC
GCCCAAGTAG TCACTTTTAT TAAACAAAAA ATTAAGTAG
|
|---|
| Protein sequence | MASNKILVID DTTVVRVKVR EMLPPGNFEV LEAKDGLEGI NLIRQEKLSL IMLDFLLPKL
SGWEVFQQVQ AHPELRKIPL VIMSGRKEEV TEKITEPFEY FEFLGKPFDQ KQLINAIKSA
MTKAKLPRQE PVGAVAAKNG NTATATMTHG AVATVAPPTV ATTTTVATAG IDADAAAEIQ
ALNDKVAKMQ AEIEGLKKQL AQVVTFIKQK IK
|
|---|
| |