Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3000 |
Symbol | |
ID | 3681235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3719863 |
End bp | 3720558 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637718346 |
Product | hexapaptide repeat-containing transferase |
Protein accession | YP_323505 |
Protein GI | 75909209 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.634764 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCATC AGAGATATTC TGCCAAATCA CAGCGATTTC AAGAACTTCT GGCAATCACT GTTTTCGGGA ATATCCCCAC ACTACTGCTA GGCCCAAAAT TAAGGAATCT CGTATATCGA ATGATTTTTG CTCACATAGG CAGTCCTGTA TATATTCAAC ATGGAGTAGA ATTTACCAAC GCTTCTAATA TTGAAATTGG CAATAGTGTA CATCTATTTA AAGGTGTACG TCTTGATGCT AAAGGGCATC CAAACAATAG AATTTATTTG GCAGATGGAG TGGCAATTGA GCGCAACGTT GATATAGGGT GTCTGGAAAA TACGTGTATT CACATTGACG TGGAAACTTT CATTGCTTCT GATGTTTGTA TTTCTGGGCC AGGAGACATC ACAATTGGTA AGCGTTGCAT GATTGCTGCT CATTCAGGTA TATATGCTAA CAATCACAAC TTTACAGATC CGATATTGCC GATTAAATAC CAAGGTGTTA CTTGTAAAGG GATCGTGATT GAGGATGATT GTTGGCTAGG ACATGGAGTA ACGGTATTGG ATGGTGTGAC CATTGGTAAA GGAAGTGTCA TTGGTGCAGG GGCAGTCGTC ACCAAAGATA TTCCCCCATT CTCCGTAGCT GTAGGCGCAC CTGCACGAGT AATTAAAAGC CGTGTTGCCC AGGATTTAGT TACATCTGGA GATTAG
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Protein sequence | MNHQRYSAKS QRFQELLAIT VFGNIPTLLL GPKLRNLVYR MIFAHIGSPV YIQHGVEFTN ASNIEIGNSV HLFKGVRLDA KGHPNNRIYL ADGVAIERNV DIGCLENTCI HIDVETFIAS DVCISGPGDI TIGKRCMIAA HSGIYANNHN FTDPILPIKY QGVTCKGIVI EDDCWLGHGV TVLDGVTIGK GSVIGAGAVV TKDIPPFSVA VGAPARVIKS RVAQDLVTSG D
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