Gene Ava_3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3000 
Symbol 
ID3681235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3719863 
End bp3720558 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content41% 
IMG OID637718346 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_323505 
Protein GI75909209 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.634764 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCATC AGAGATATTC TGCCAAATCA CAGCGATTTC AAGAACTTCT GGCAATCACT 
GTTTTCGGGA ATATCCCCAC ACTACTGCTA GGCCCAAAAT TAAGGAATCT CGTATATCGA
ATGATTTTTG CTCACATAGG CAGTCCTGTA TATATTCAAC ATGGAGTAGA ATTTACCAAC
GCTTCTAATA TTGAAATTGG CAATAGTGTA CATCTATTTA AAGGTGTACG TCTTGATGCT
AAAGGGCATC CAAACAATAG AATTTATTTG GCAGATGGAG TGGCAATTGA GCGCAACGTT
GATATAGGGT GTCTGGAAAA TACGTGTATT CACATTGACG TGGAAACTTT CATTGCTTCT
GATGTTTGTA TTTCTGGGCC AGGAGACATC ACAATTGGTA AGCGTTGCAT GATTGCTGCT
CATTCAGGTA TATATGCTAA CAATCACAAC TTTACAGATC CGATATTGCC GATTAAATAC
CAAGGTGTTA CTTGTAAAGG GATCGTGATT GAGGATGATT GTTGGCTAGG ACATGGAGTA
ACGGTATTGG ATGGTGTGAC CATTGGTAAA GGAAGTGTCA TTGGTGCAGG GGCAGTCGTC
ACCAAAGATA TTCCCCCATT CTCCGTAGCT GTAGGCGCAC CTGCACGAGT AATTAAAAGC
CGTGTTGCCC AGGATTTAGT TACATCTGGA GATTAG
 
Protein sequence
MNHQRYSAKS QRFQELLAIT VFGNIPTLLL GPKLRNLVYR MIFAHIGSPV YIQHGVEFTN 
ASNIEIGNSV HLFKGVRLDA KGHPNNRIYL ADGVAIERNV DIGCLENTCI HIDVETFIAS
DVCISGPGDI TIGKRCMIAA HSGIYANNHN FTDPILPIKY QGVTCKGIVI EDDCWLGHGV
TVLDGVTIGK GSVIGAGAVV TKDIPPFSVA VGAPARVIKS RVAQDLVTSG D