Gene Ava_2993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2993 
Symbol 
ID3681228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3711947 
End bp3712954 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content45% 
IMG OID637718339 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_323498 
Protein GI75909202 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0321948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.72788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAGC AGCGCGTTCT GTCGGGAGTT CAACCAACTG GTAATCTACA TTTGGGTAAC 
TATTTAGGGG CAATTCGCAA CTGGGTAGAA ATTCAAGACC AGTACGATAA TTTCTTTTGT
GTAGTGGATT TACACGCAAT TACTGTACCG CATAATCCAG CTACATTGGC GGCAGACACT
TATGCGATCG CTGCACTTTA TTTAGCCTGT GGTATTGATT TAAAATACTC GAATGTCTTT
GTCCAATCCC ACGTCTCAGC CCACACTGAA CTTGCTTGGT TTCTCAACTG CATCACCCCC
CTAAATTGGC TACAAGACAT GATTCAGTTT AAGGAGAAAG CAGTCAAGCA AGGGGAAAAC
GTCGGTGCAG GCTTGTTAAT CTATCCAGTG CTGATGGCGG CTGATATCTT GCTTTACCAA
GCCGATAAAG TGCCGGTAGG TGAAGACCAA AAGCAACACT TGGAACTAAC ACGGGATATT
GTCAACAGAT TTAATCACCA ATTCGCCAAA GATAAACCTG TGCTGAAATT GCCAGAACCT
TTAATCCGCA AGGAAGGGGC AAGGGTGATG AGTCTCACCG ACGGGACACG CAAAATGTCT
AAATCTGACC CCTCAGAGTT AAGCCGCATT AACGTTTTAG ACCCACCAGA CCAGATTGCT
AATAAGATTA AACGTTGTAA AACTGACCCA GTCAAAGGTT TAACCTTCGA CGACCCAGAA
CGCCCAGAGT GCAACAACTT GCTGACTTTA TATATGCTAC TGTCTGGTAA AAAGAAAGAA
GAAGTAGCCG CAGAATGTCA AGACATGGGC TGGGGACAAT TCAAGCCACT ATTAACCGAA
ACAGCCATCA ACGCCCTCAA ACCCATCCAA GAAAAATATC AAGAAATCAC CGCCGACAAA
GGCTATCTAG AATCAGTCTT ACGTGACGGA CGAGAAAAAG CCGAAGCCGT CGCCAACCAA
ACTCTAGCAG ATGTGAGAGC GGCGTTAGGG TATTCTGTAC CTGTTTAA
 
Protein sequence
MGKQRVLSGV QPTGNLHLGN YLGAIRNWVE IQDQYDNFFC VVDLHAITVP HNPATLAADT 
YAIAALYLAC GIDLKYSNVF VQSHVSAHTE LAWFLNCITP LNWLQDMIQF KEKAVKQGEN
VGAGLLIYPV LMAADILLYQ ADKVPVGEDQ KQHLELTRDI VNRFNHQFAK DKPVLKLPEP
LIRKEGARVM SLTDGTRKMS KSDPSELSRI NVLDPPDQIA NKIKRCKTDP VKGLTFDDPE
RPECNNLLTL YMLLSGKKKE EVAAECQDMG WGQFKPLLTE TAINALKPIQ EKYQEITADK
GYLESVLRDG REKAEAVANQ TLADVRAALG YSVPV