Gene Ava_2988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2988 
Symbol 
ID3681223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3706528 
End bp3707250 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content44% 
IMG OID637718334 
Producthypothetical protein 
Protein accessionYP_323493 
Protein GI75909197 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00225611 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.747663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTG CAACCAATCC CTCCACCGAC CTCACTCCTT TCCCAGACCA TACGCAACTA 
CCAGAGTCCG ATGGCACTTT TGTGAAAAAC TTTCAGGAAC ATCCCCAAAG CATTCTACTC
ACCGACTCGA TTAAACCTGT ATTACAAAAA CGCCATTCTG ATGGACAATA CTGTATAGGT
CAAGATAGTG GTATCTACTG GCGGATGACT GACCCTCCAG AGAAAGACGC AGAAGCACCA
GATTGGTTTT ATGTACCGAA TGTCCCACCT TTACTTGATG GACAAACACG ACGATCTTAT
GTGCTGTGGC GTGAGTTTAT TTCCCCATTA ATTGCTTTGG AATTTGTTTC TGGTGATGGT
ACGGAGGAAC GAGACAAAAC ACCTTGGAAG GGGAAATTTT GGATTTATGA GCAGGTAATT
CATCCGGCTT TTTACGGTAT TTATGAAGTA AATAAAGCTA GTGTAGAAGT TTATGAATTA
ATTGGTGGGC AATATGAATT ATTACCAGTT AATGAGCGCG GACATTATCC CATACATCCA
TTAGGTGTGG AGTTAGGTAT ATGGGAGGGT GAATATCAAA ATATGGAATT ACCCTGGCTG
CGCTGGTGGG ATTTGCAGGG TAATTTGTTG CTGACAGGAG AAGAAAGGAC GGAACAGGAA
CGTCAAAGGA ATGAACGCCT CATAGCACAA TTACGATCGC TCGGTGTAGA GCCTGACGCT
TAA
 
Protein sequence
MTSATNPSTD LTPFPDHTQL PESDGTFVKN FQEHPQSILL TDSIKPVLQK RHSDGQYCIG 
QDSGIYWRMT DPPEKDAEAP DWFYVPNVPP LLDGQTRRSY VLWREFISPL IALEFVSGDG
TEERDKTPWK GKFWIYEQVI HPAFYGIYEV NKASVEVYEL IGGQYELLPV NERGHYPIHP
LGVELGIWEG EYQNMELPWL RWWDLQGNLL LTGEERTEQE RQRNERLIAQ LRSLGVEPDA