Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2988 |
Symbol | |
ID | 3681223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 3706528 |
End bp | 3707250 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637718334 |
Product | hypothetical protein |
Protein accession | YP_323493 |
Protein GI | 75909197 |
COG category | [S] Function unknown |
COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00225611 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.747663 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCTG CAACCAATCC CTCCACCGAC CTCACTCCTT TCCCAGACCA TACGCAACTA CCAGAGTCCG ATGGCACTTT TGTGAAAAAC TTTCAGGAAC ATCCCCAAAG CATTCTACTC ACCGACTCGA TTAAACCTGT ATTACAAAAA CGCCATTCTG ATGGACAATA CTGTATAGGT CAAGATAGTG GTATCTACTG GCGGATGACT GACCCTCCAG AGAAAGACGC AGAAGCACCA GATTGGTTTT ATGTACCGAA TGTCCCACCT TTACTTGATG GACAAACACG ACGATCTTAT GTGCTGTGGC GTGAGTTTAT TTCCCCATTA ATTGCTTTGG AATTTGTTTC TGGTGATGGT ACGGAGGAAC GAGACAAAAC ACCTTGGAAG GGGAAATTTT GGATTTATGA GCAGGTAATT CATCCGGCTT TTTACGGTAT TTATGAAGTA AATAAAGCTA GTGTAGAAGT TTATGAATTA ATTGGTGGGC AATATGAATT ATTACCAGTT AATGAGCGCG GACATTATCC CATACATCCA TTAGGTGTGG AGTTAGGTAT ATGGGAGGGT GAATATCAAA ATATGGAATT ACCCTGGCTG CGCTGGTGGG ATTTGCAGGG TAATTTGTTG CTGACAGGAG AAGAAAGGAC GGAACAGGAA CGTCAAAGGA ATGAACGCCT CATAGCACAA TTACGATCGC TCGGTGTAGA GCCTGACGCT TAA
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Protein sequence | MTSATNPSTD LTPFPDHTQL PESDGTFVKN FQEHPQSILL TDSIKPVLQK RHSDGQYCIG QDSGIYWRMT DPPEKDAEAP DWFYVPNVPP LLDGQTRRSY VLWREFISPL IALEFVSGDG TEERDKTPWK GKFWIYEQVI HPAFYGIYEV NKASVEVYEL IGGQYELLPV NERGHYPIHP LGVELGIWEG EYQNMELPWL RWWDLQGNLL LTGEERTEQE RQRNERLIAQ LRSLGVEPDA
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