Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2980 |
Symbol | |
ID | 3681273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 3697001 |
End bp | 3697402 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637718326 |
Product | Beta-Ig-H3/fasciclin |
Protein accession | YP_323485 |
Protein GI | 75909189 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.231392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGATA TTGTTGATAT TGCAGTTAGT GCAGATAGTT TTAAAACTCT GGTGACAGCT GTACAAGCTG CTGGTTTAGT AGAAACTTTA AAAAGTCCAG GGCCGTTTAC TGTTTTCGCA CCAAACGACG ATGCTTTTGC TAAGTTACCC CCAGGAACTA TACAAACTTT GGTGCAGAAT ATTCCCCAAT TAACGAGAAT ATTAACGTAT CATGTGGTAC CTGGCAAGCT GAAGCAGGCT GATTTAGCAA AACTTGGCAC AGTTACATCC GTGGAAGGTT CACCGATTAA AATTGATTGT GCTGATGGTT TTGAGGTGAA AAATGCCACA GTTTTAGCCG CAGATATTGA AGCAGATAAC GGTATAATTC ACGTCATCGA TACTGTAATT CTGATGGGTT AA
|
Protein sequence | MADIVDIAVS ADSFKTLVTA VQAAGLVETL KSPGPFTVFA PNDDAFAKLP PGTIQTLVQN IPQLTRILTY HVVPGKLKQA DLAKLGTVTS VEGSPIKIDC ADGFEVKNAT VLAADIEADN GIIHVIDTVI LMG
|
| |