| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2975 |
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| Symbol | |
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| ID | 3681268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 3690422 |
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| End bp | 3692572 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637718321 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_323480 |
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| Protein GI | 75909184 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAATC AATTTGTTGT ATCCTTTCTT TTGAAAAGCG CTTTAGTCTT TTCGCCTTTT
CTGCTGTGTG CTGATATTAG CCGTGGACAA GCTACAGTAT CTATCTCTCA ACAAAAAATA
CTTGCTCAAG CATTAACAAA TCAGGAAAGA GAAGAGTTAA CAAGATTACG TGCAGAAAAG
AGCGATCGCG CCCAAATTCA AGCTGATTTT GAGCAAGCCT TTAGCCGTAC AACCGTCCTG
CTCAATATCT GGTTAGTCAT CCTTAGTTTA TTTCCTGTCG CCATTATTGC TCTATTTTGG
TTGTTAAGAC GAGTAGCCAT TCGAGAAATT GTGAATAGAG CAATGTCACA ATTCGAGGGA
GTAGACAAAC TAGAAACTCA GTTAATCATC GTTAAACAAG ATGCTGAAAA TCTCATCCAA
GATACAAAAA GTATCAATCG CCTTTTAGAA AGAGAAATTG ATTCCTTACA GCAAAAGATT
AAAATTGAGC AAGAAAATTT ATCTCTTGTA ACATCCGAGT TACTGCAAGC AAAAACAGAT
AACTTAGCGC AAATAGCAAC AGAGATTGCT ACTTTTCAAA GTAAGGTAGA GAGTTTATTT
GGGGAATTTT CTCATAGATT AACTCAATCT GAGTCAGATA CTCAAAAGCT CAAAGATATG
ACTTTAGAAA ATATAGTTAA GATAGAGTCG CTACTTGAGC ATCAACTTGC AGAACTACAA
AAAGAAGCTG AGAAACACCA AAAGACAGTT TTAGGGGATA TAGATACTGC TGGGTTTGAT
TTTAAGAATT ATCTGATAAA TTTACAGGCA GAAACTCAGA AATATAAAAA TAGTATTTTT
GATGATTTGT CTCGCCTGCA ATCAGAATTA CAGGGGTATT TACAACAACA GAAAGATATT
CAGCTAGGAA ATATTCAAGA AGTCGCCAAT ATTTTTAATA ACCAAGTCTC AGAACTGCAA
TTAGAAGCCC AAAAGCAAAA ATATTCACTG GATAATAATT TAAACAAATT GCAGACAGAT
ACACAAATAC ATAAAGATGA AATTATCCAG CGTTTAGAAG AACTGAAAGA TTTATTCCAA
GCTCAAGTTG CTGAATTACA AATACAGACT CAGCAAGAGT TAGCATCATA TCTATCTGAA
CTCAAAATAG ATACTGAAAA TAGTAAAGAG AAAATTATTG AGGAATTAGA AAAATATGAG
TCAGATTTTA TTTCCCAATT TTCGGAATTA CAGTTTAATG CTCAACAACA AAAGTTGCTG
ATTTTAGAAA AGCTAGAGAG ATTAGAAACA GATTTTGTCA ACCAACTCTC AGAGCTACAA
TTAGATGCTC AACGGCGTAA GGATATAATT CTGCAAGAGT TGATAGAAAA TAAACTTCCT
GTGATTGTGG AAGCACAACC TATACACAAA GCTCAATCAG AAGTTTTAGT AAATGAAAAT
GAACAGCCAC AATTAAGCTT TGATGAATGT ATTGAACAGG GAGATAGTCT GTTTTCTCAA
AAGAGTTATG AAGAAGCGAT CGCCTATTAC GAACAAGCTA TTAAACTCCA ACAAAATAAT
GCTGTAGCTC GGTTTAAGCA TGGCTTAACT TCTGCAAGGT TGAAACGCTT TAAAGATGCG
ATAAAATCTT ATCATCAGGC TATTAAGATG CAACCAAACT ATCATCAGGC TTGGTGTGAT
CTTGGTGTGG CTTTTGGAAA TATCCGCCGA CATCAAGAAG CATTTGCCGC CTTTGATAAA
GCTACGCAAG TTAAACCTGA TGATACAGTT GCGTGGTCAA ATCGCGGCTT GGCTTTGATA
GAATTAGAAG AATATGAAGA AGCGATCGCC TCTTTTGATA AAGCCTTAGA ATTACAACCG
AACTCTGCGA AAATTTGGGA CAAACGCGGT TACACTCTAG TCAGATTAGG TCGTGATGAT
GAAGCAATCA CCTCTTTTAA TCAAGCTTTA GAAATTAAAC CAGAATACGC AAGTGCTTAT
TATAACAAAG CCGTCTGTTA TGCACTGCAA CGAGATGTTG AATCATCTCT AGAAAATCTG
CAACAAGCCA TTACTCTAAA TCCCAAATAT AAAGAAGATG CTGCCACTGA TATAGATTTT
GATGAGATTG CAGATGATGA AAAATTTAAA CAATTAATTG CAACTCCGTA G
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| Protein sequence | MKNQFVVSFL LKSALVFSPF LLCADISRGQ ATVSISQQKI LAQALTNQER EELTRLRAEK
SDRAQIQADF EQAFSRTTVL LNIWLVILSL FPVAIIALFW LLRRVAIREI VNRAMSQFEG
VDKLETQLII VKQDAENLIQ DTKSINRLLE REIDSLQQKI KIEQENLSLV TSELLQAKTD
NLAQIATEIA TFQSKVESLF GEFSHRLTQS ESDTQKLKDM TLENIVKIES LLEHQLAELQ
KEAEKHQKTV LGDIDTAGFD FKNYLINLQA ETQKYKNSIF DDLSRLQSEL QGYLQQQKDI
QLGNIQEVAN IFNNQVSELQ LEAQKQKYSL DNNLNKLQTD TQIHKDEIIQ RLEELKDLFQ
AQVAELQIQT QQELASYLSE LKIDTENSKE KIIEELEKYE SDFISQFSEL QFNAQQQKLL
ILEKLERLET DFVNQLSELQ LDAQRRKDII LQELIENKLP VIVEAQPIHK AQSEVLVNEN
EQPQLSFDEC IEQGDSLFSQ KSYEEAIAYY EQAIKLQQNN AVARFKHGLT SARLKRFKDA
IKSYHQAIKM QPNYHQAWCD LGVAFGNIRR HQEAFAAFDK ATQVKPDDTV AWSNRGLALI
ELEEYEEAIA SFDKALELQP NSAKIWDKRG YTLVRLGRDD EAITSFNQAL EIKPEYASAY
YNKAVCYALQ RDVESSLENL QQAITLNPKY KEDAATDIDF DEIADDEKFK QLIATP
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