Gene Ava_2972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2972 
Symbol 
ID3681265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3686983 
End bp3688596 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content42% 
IMG OID637718319 
Producthypothetical protein 
Protein accessionYP_323478 
Protein GI75909182 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAAGA TTCTGATTTT GTCAGCTAAT CCCACAAATA CCGGCTTACT GCGTTTAGAT 
AAGGAAGTCA GGGAAATTCA GACAGGATTA GAACGTGCGA GAAACCGAGA TAAATTTGAC
ATTATTACTA AATGGGCTGT GCGTCCTGAA GATTTGCGCA GGGCGCTTTT AGACTATGAA
CCGCACATTG TGCATTTTTC TGGTCATGGT GTTGGTCATC AGGGTTTGAT ACTGGAAAAT
GATGCTGAGG AAGGCCAACT GGTAAGTACA GAAGCACTGG CTGATCTATT TGGGTTATTT
AAAGACAAAA TTGAGTGCGT ATTATTAAAC GCCTGTTATA GCGAGGTGCA AGCGGAGGCG
ATTCACCAAC ACATTGATTG TGTGATGGGG ATGAATCAGG GAATTGGGGA TGTGGCAGCG
ATCGCTTTTG CCATTGGGTT TTATGATGCT CTAGGAGCTA ATAAATCTTA TGAGACGGCT
TATGAGTTTG GCTGTAATGC TATTGATCTC AACAGCATTC CTGAATCTTC TACACCAGTC
CTCAAAAGTC GCAAACATCA AGCACAGACA TCTCAAATAA CGCCTGCTGT AGCCTTAGAA
ATTCCAGAGG GGCAAGTTCC TCTAGATTCA GCTTTTTATG TGGAACGTCC GCCAGTGGAA
GCAGACTGTT ACCGACAAAT TATGCAATCC GGGGCTTTGA TTCGGATGAA AGCACCGCGA
CAAATGGGCA AAAGTTCATT GATGTCCAGG GTGCTGGATC ACGCTAGTAA ACATGGCTGC
AAAACCACCT CAGTGAACCT CCAGTCAGCC GATGCAGAGT TTTTGGGCAG TTTGGATCTA
TTTTTACAGT GGTTCTGTGC CAGCATTACT GATAGTCTCA ATCTGCCCGA AAAGTTAAGC
GACTATTGGC AAGGTGTTTT GGGAAGTAAG AACAAGTGTA CAAATTACTT TCAAAGATAT
TTGTTACCGG AAATTAATAG TCCCATCGCT TTGGGTTTGG ATGAAGTGGA CGAAATTTTC
AAACATCCCC AAATTGCTAC AGATTTTTTC GGGTTGCTGC GGGCTTGGCA TGAGCGTGCT
AAAAATGACG CAGTTTGGAA AAATCTCCGG TTAATCATTG TGCATTCTAA GGAGGTGTAC
ATTCCTTTAA ATATCAATCA GTCGCCTTTT AATGTCGGTT TCCCTGTAGA TTTACCAGAG
TTGAATCAAC TACAAGTACA AGATTTATTA CAGCGTCATC AACTCACTTG GACTAATTTC
CAGGTGGAAC AGTTAATGAT GTTGGTGGGT GGACATCCTT ATTTAGTCAG GGTAGCGCTT
TATCAAATTG CCCAAGACAG GATGACCTTA GACCAACTCC AACACATCGC CCCCACAGAA
GCAGGCCCCT ATAATGACCA TTTACGCCGC CATTTATTGA GTTTACAAGA TGATGAGCAA
TTACTGGCAG CACTCAAGCA AGTGGTAACA GTAGATTATC CTGTGGATGT GGGAACAACA
GCAGCCTTTA AACTCCGCAG TATGGGCTTA GTAAAATTTG AAGGAAATAA AGTTATGTCT
TTGTGTAATT TATATAGTAA ATATTTTAGC GATCGCTTAG GTTTGAACAA ATAA
 
Protein sequence
MKKILILSAN PTNTGLLRLD KEVREIQTGL ERARNRDKFD IITKWAVRPE DLRRALLDYE 
PHIVHFSGHG VGHQGLILEN DAEEGQLVST EALADLFGLF KDKIECVLLN ACYSEVQAEA
IHQHIDCVMG MNQGIGDVAA IAFAIGFYDA LGANKSYETA YEFGCNAIDL NSIPESSTPV
LKSRKHQAQT SQITPAVALE IPEGQVPLDS AFYVERPPVE ADCYRQIMQS GALIRMKAPR
QMGKSSLMSR VLDHASKHGC KTTSVNLQSA DAEFLGSLDL FLQWFCASIT DSLNLPEKLS
DYWQGVLGSK NKCTNYFQRY LLPEINSPIA LGLDEVDEIF KHPQIATDFF GLLRAWHERA
KNDAVWKNLR LIIVHSKEVY IPLNINQSPF NVGFPVDLPE LNQLQVQDLL QRHQLTWTNF
QVEQLMMLVG GHPYLVRVAL YQIAQDRMTL DQLQHIAPTE AGPYNDHLRR HLLSLQDDEQ
LLAALKQVVT VDYPVDVGTT AAFKLRSMGL VKFEGNKVMS LCNLYSKYFS DRLGLNK