Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2963 |
Symbol | |
ID | 3681333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 3671722 |
End bp | 3672672 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637718310 |
Product | ABC transporter-like |
Protein accession | YP_323469 |
Protein GI | 75909173 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.23893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAAAAG AATTAGCAAT TCGTACCCGT GGATTAACTA AGCAATTTGA ACGACATATT GCCGTCAATG ACGTTGATTT AGAGATCCAA ATGGGTGAAG TATATGGGTT AATTGGGCCG AATGGTGCGG GAAAAACAAC TCTCATCCGA ATGTTAGCAG CAGCTGAGGA ACAAACTACA GGGGAAATTT ATATTAACGG GGAACATCTA CGACTTGATA AAAGTAACTC CACTCTCAAG CGTCACCTTG GCTACCTACC TGATGACTAT CCTCTGTACG AAGATTTAAC AGTCTGGGAT TACTTAGATT ATTTTGCGAG GCTGTATCGC TTGCGGGAAC CACGCCGGAC TCAACGCCTA CATGAAGTTT TAGAACTGAT ACAACTAGAA AATAAACGTA AAAGCCAAAT TTCTACCCTA TCACGGGGGA TGAAACAGCG TTTGAGTTTA GCACGGACGA TTATTCATGA ACCCATTTTA CTGCTGTTAG ATGAGCCTGT TTCTGGGCTT GATCCCATTG CGAGAATGCA GTTTCGGCAA ATCATTAAAG CGTTGCAAGA AGCGGGGATG ACAATATTAA TTTCTTCTCA TGTTTTGAGT GATTTAGCCG AACTTTGTAC ATCTGTAGGG ATTATGGAGT TGGGTTTTTT AGTAGAAAGC GCTTCACTGC AAGCACTTTA CCAACGACTT TCTCAGCAAC AGATTATGTT ATCTACATCG GGTAGTTTAG AATCTCTTAT GAGTGAATTA AAAAATTATC CATTAGTCGA GCAATGTGAG AAAATACCGG GAAAAAATAG CATAAGGGTT AATTTTGCTG GTACACAAGA TGATTGTGCA GAATTACTGC GATCGCTCAT TCTCTCCGGT ATCCCCATAA CTAACTTTCA TTGTACACAA GAAGATTTGG AAAGTATCTT CTTAAAATTA GGACACAAAC AAGCATCTTA A
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Protein sequence | MVKELAIRTR GLTKQFERHI AVNDVDLEIQ MGEVYGLIGP NGAGKTTLIR MLAAAEEQTT GEIYINGEHL RLDKSNSTLK RHLGYLPDDY PLYEDLTVWD YLDYFARLYR LREPRRTQRL HEVLELIQLE NKRKSQISTL SRGMKQRLSL ARTIIHEPIL LLLDEPVSGL DPIARMQFRQ IIKALQEAGM TILISSHVLS DLAELCTSVG IMELGFLVES ASLQALYQRL SQQQIMLSTS GSLESLMSEL KNYPLVEQCE KIPGKNSIRV NFAGTQDDCA ELLRSLILSG IPITNFHCTQ EDLESIFLKL GHKQAS
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