Gene Ava_2963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2963 
Symbol 
ID3681333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3671722 
End bp3672672 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content40% 
IMG OID637718310 
ProductABC transporter-like 
Protein accessionYP_323469 
Protein GI75909173 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.23893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAAAG AATTAGCAAT TCGTACCCGT GGATTAACTA AGCAATTTGA ACGACATATT 
GCCGTCAATG ACGTTGATTT AGAGATCCAA ATGGGTGAAG TATATGGGTT AATTGGGCCG
AATGGTGCGG GAAAAACAAC TCTCATCCGA ATGTTAGCAG CAGCTGAGGA ACAAACTACA
GGGGAAATTT ATATTAACGG GGAACATCTA CGACTTGATA AAAGTAACTC CACTCTCAAG
CGTCACCTTG GCTACCTACC TGATGACTAT CCTCTGTACG AAGATTTAAC AGTCTGGGAT
TACTTAGATT ATTTTGCGAG GCTGTATCGC TTGCGGGAAC CACGCCGGAC TCAACGCCTA
CATGAAGTTT TAGAACTGAT ACAACTAGAA AATAAACGTA AAAGCCAAAT TTCTACCCTA
TCACGGGGGA TGAAACAGCG TTTGAGTTTA GCACGGACGA TTATTCATGA ACCCATTTTA
CTGCTGTTAG ATGAGCCTGT TTCTGGGCTT GATCCCATTG CGAGAATGCA GTTTCGGCAA
ATCATTAAAG CGTTGCAAGA AGCGGGGATG ACAATATTAA TTTCTTCTCA TGTTTTGAGT
GATTTAGCCG AACTTTGTAC ATCTGTAGGG ATTATGGAGT TGGGTTTTTT AGTAGAAAGC
GCTTCACTGC AAGCACTTTA CCAACGACTT TCTCAGCAAC AGATTATGTT ATCTACATCG
GGTAGTTTAG AATCTCTTAT GAGTGAATTA AAAAATTATC CATTAGTCGA GCAATGTGAG
AAAATACCGG GAAAAAATAG CATAAGGGTT AATTTTGCTG GTACACAAGA TGATTGTGCA
GAATTACTGC GATCGCTCAT TCTCTCCGGT ATCCCCATAA CTAACTTTCA TTGTACACAA
GAAGATTTGG AAAGTATCTT CTTAAAATTA GGACACAAAC AAGCATCTTA A
 
Protein sequence
MVKELAIRTR GLTKQFERHI AVNDVDLEIQ MGEVYGLIGP NGAGKTTLIR MLAAAEEQTT 
GEIYINGEHL RLDKSNSTLK RHLGYLPDDY PLYEDLTVWD YLDYFARLYR LREPRRTQRL
HEVLELIQLE NKRKSQISTL SRGMKQRLSL ARTIIHEPIL LLLDEPVSGL DPIARMQFRQ
IIKALQEAGM TILISSHVLS DLAELCTSVG IMELGFLVES ASLQALYQRL SQQQIMLSTS
GSLESLMSEL KNYPLVEQCE KIPGKNSIRV NFAGTQDDCA ELLRSLILSG IPITNFHCTQ
EDLESIFLKL GHKQAS