| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2960 |
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| Symbol | |
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| ID | 3681330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 3668163 |
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| End bp | 3668795 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637718307 |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_323466 |
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| Protein GI | 75909170 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.438043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGATT TCTTCTTAAT TAAGTATGCT CCAGAAATCC TACAACGCAC GATAGAGCAT
TTATTTTTAG TAGGTATTGC TATTAGTATT GCCATTATTA TTGGCATTCC TTTAGGAATT
TTAATCACGC GCCAAAAACA ACTGCGGCAA CCGATTTTAG GTATAGCTAA TATTCTCCAA
ACTATACCCA GTTTAGCATT GTTTGGCTTA CTCATCCCCG TTCCTGTAAT TGGTGGTATT
GGTGCGACTC CAGCAATTGT TGCCCTGGCT TTATATTCTC TTTTGCCACT AATTCGTAAT
ACTTATACAG GCATCTCTGG AGTAGATCCG GCGATTCGAG AAGCTGGGCG GGGAATGGGT
ATGACTGATA GACAATTGTT ATTACAGGTA GAAATTCCCT TAGCGATGGC AGTTATTTTG
GCTGGGGTGC GAGTAGCGAC AGTTATCTCT ATTGGAATTG CCACTATTGC AGCTGCCATT
GGTGCTGGTG GTTTGGGAGT CTTTATTTTT AGAGGAATTG CCGTAGTCAA TGATCAATTA
ATTTTAGCTG GGGCAGTTCC TGCGGCGGTA ATTGCTTTAT TGGCTGATTT ATTAATTGGA
TTGTTAGAGC AAAAATTCAA GGTTAATTCG TAA
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| Protein sequence | MKDFFLIKYA PEILQRTIEH LFLVGIAISI AIIIGIPLGI LITRQKQLRQ PILGIANILQ
TIPSLALFGL LIPVPVIGGI GATPAIVALA LYSLLPLIRN TYTGISGVDP AIREAGRGMG
MTDRQLLLQV EIPLAMAVIL AGVRVATVIS IGIATIAAAI GAGGLGVFIF RGIAVVNDQL
ILAGAVPAAV IALLADLLIG LLEQKFKVNS
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