Gene Ava_2952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2952 
Symbol 
ID3681322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3657836 
End bp3659035 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content44% 
IMG OID637718299 
ProductN-acetylglucosamine 6-phosphate deacetylase 
Protein accessionYP_323458 
Protein GI75909162 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1820] N-acetylglucosamine-6-phosphate deacetylase 
TIGRFAM ID[TIGR00221] N-acetylglucosamine-6-phosphate deacetylase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATT ACCAATTAAC AATTACCGAT TACCAATTAC CAACTACCAT ACACAAACCT 
ACAGATATTA TTAATGCTAG AGTTCCTGGC TACCAAGATT TGCAGATGCT TGTGGTGAAT
CAGGGAGGCA TAATTGAACA AATATCACCG ATGAGGGCTG GATTTAACAG GGTTGCGTCA
CCAGAGTTAC AAATTATAGA TGTGGCTGGA GATTGGATTT CTTTGGGTGG CGTTGATTTG
CAAATTAATG GTGCTTTGGG CTTGGCGTTT CCTGATTTGG CGGCTGAGAA TGCCTATTTA
TTAGAAAAAA TTTGCCAATT TTTATGGGAT GTGGGAGTAG ATGGATTTTT ACCTACACTG
GTAACAACTT CAGTGGAAAA TATCCAGCGA TCGCTTGCTG TTATTGCTGA TTTTATCTCT
ACCACAAAAC CTGGTTCCCA AATTTTAGGC GTACATTTAG AAGGCCCCTT CTTAAACTAT
CAAAAGCGGG GCGCTCATCC AGCCGAGTAT TTACTACCTC TGACCATAGA AGAAGTCCAA
CGGGTTTTGG GAGATTATGC CCATATTGTT AAAGTCATCA CCCTAGCACC GGAGTTAGAT
ACTACTGGGG AAGTCATCCC ATATTTACGT TCTTTGGGAA TCACCGTCAG TTTAGGACAT
TCTCTGGCAA CAGCTAACCA AGCCCAAAAT GCTTTTGCAT TGGGTGCAAC AATGGTAACT
CATGCCTTTA ATGCCATGCC TCCCTTACAT CACCGCGAAC CGGGACTCTT AGGGGCAGCT
ATAACTAATC CTCATGTCAT GTGTGGTTTT ATTGCCGATG GCCAGCACGT TTCACCCATC
ATGTTGCAAA TCCTTCTCCG TGCCAGTCAA GGGATATTTC TCGTTAGTGA TGCCCTCGCT
CCTTTGGGGC TAACGGATGG AGTGTATCCT TGGGACAGTC GGCAAATAGA AGTTCAAGGG
GGTACTGCAC GGCTACCAGA TGGTACATTA TCAGGCACAA CCTTACCTTT ATTGGTAGGG
GTAGAAAACT TAGCGAATTG GGAAATTTGC GATGTGGAAA CTGCGCTGTT ACTTGCTACT
GATGCCCCCA GAAAGGCAAT TGGTTTGCCA GGAATGACAC CGGGTCAACC TGGGAATTTA
TTGCGCTGGC ATTGGGATAG TCATGGAAAA AAACTTACAT GGCAGCGATT GTTCAGCTAA
 
Protein sequence
MNNYQLTITD YQLPTTIHKP TDIINARVPG YQDLQMLVVN QGGIIEQISP MRAGFNRVAS 
PELQIIDVAG DWISLGGVDL QINGALGLAF PDLAAENAYL LEKICQFLWD VGVDGFLPTL
VTTSVENIQR SLAVIADFIS TTKPGSQILG VHLEGPFLNY QKRGAHPAEY LLPLTIEEVQ
RVLGDYAHIV KVITLAPELD TTGEVIPYLR SLGITVSLGH SLATANQAQN AFALGATMVT
HAFNAMPPLH HREPGLLGAA ITNPHVMCGF IADGQHVSPI MLQILLRASQ GIFLVSDALA
PLGLTDGVYP WDSRQIEVQG GTARLPDGTL SGTTLPLLVG VENLANWEIC DVETALLLAT
DAPRKAIGLP GMTPGQPGNL LRWHWDSHGK KLTWQRLFS