Gene Ava_2945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2945 
Symbol 
ID3681374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3651234 
End bp3652160 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content41% 
IMG OID637718292 
Productputative iron transport system substrate-binding protein 
Protein accessionYP_323451 
Protein GI75909155 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATA GTAGTGTGAG AATTGTATCT CTGATTCCTA GTGCAACAGA GATTTTAGCA 
AACTTGGGTT TGAGTGATGC TATTGTTGGG CGATCGCATG AATGTGATTA TCCCCCAGAA
ATCCAAAATC GTCCAACTTG TACGCAAGCA CGGTTGAATA GTGATGCTTC CAGCAGCGAG
ATTCATCATG AAGTGAATAA TGTACTGCAA TCTGCGCTGA GTATTTATCA GGTAAAATTA
GACGTTTTGG AGCAATTAAA GCCTACCCAT ATTTTGACCC AAGACCAGTG TGATGTCTGT
GCAGTCAGCC TCAAAGATGT AGAAGAAGCG GTTAAAGAAC TTACCCAAAG TTCTCCCCAA
ATCATTTCCT TGCAACCTAA TCTGCTTGAG GATGTATGGC AGGATATTGA GCGCGTAGCT
CATATCTTTG GTGTAGACTC AGTAAAAATA CTAGATAATT TAGAAGCCCG TGTCAAAATT
TGCCAACAAA AAATTCAAGG GCTTTCTCTA GAAGAAGTAC CGACTGTGGC TTGTATTGAG
TGGACAGACC CACTGATGGC CGCAGCAAAT TGGATTCCTG AATTAGTCAA CTTAGCTGGG
GGACAAACAC TATTTTCCCT TATAGGTCAG CCGTCCCCAC ATTTGGAATG GGAAAATCTT
TTAATTAGTA ATCCAGATAT TATAATTTTC ATGCCTTGTG GCTTTAACTT ACAACGAACT
CGTCAAGAAG CCCAACTATT CACTCAAAAC CCAGAATGGA CAAAACTGCA CGCCAGCCAA
ACTGGTAGAG TTTACATCAC TGATGGTAAT TCCTATTTCA ACCGTCCAGG CCCCCGACTG
GTAGATTCTC TAGAGATATT GTCAGAGATT TTACACCCAG AAATTTTTGA TTATGGTTAC
AAGGGTACTG CTTGGGAACC TTTATAA
 
Protein sequence
MENSSVRIVS LIPSATEILA NLGLSDAIVG RSHECDYPPE IQNRPTCTQA RLNSDASSSE 
IHHEVNNVLQ SALSIYQVKL DVLEQLKPTH ILTQDQCDVC AVSLKDVEEA VKELTQSSPQ
IISLQPNLLE DVWQDIERVA HIFGVDSVKI LDNLEARVKI CQQKIQGLSL EEVPTVACIE
WTDPLMAAAN WIPELVNLAG GQTLFSLIGQ PSPHLEWENL LISNPDIIIF MPCGFNLQRT
RQEAQLFTQN PEWTKLHASQ TGRVYITDGN SYFNRPGPRL VDSLEILSEI LHPEIFDYGY
KGTAWEPL