Gene Ava_2934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2934 
Symbol 
ID3681363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3638700 
End bp3639530 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content48% 
IMG OID637718281 
ProductHEAT repeat-containing PBS lyase 
Protein accessionYP_323440 
Protein GI75909144 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGAAC CCAGTGTGGA AGAATTTCCC GCAGACAACG GGCCACAGCT AACACCAGAA 
CTAGCCATAG CTAATCTGCA ATCATCAGAC TTAAGTCTCC GCTATTATGC TGCTTGGTGG
ATAGGCAAGT ATCGGGTGAA GGAAGGTGCT GCTGTTGATG GTTTAATTGC AGCCTTAGAG
GATGAAGCCG ATAGAACTGA ACTTGGTGGT TATCCTTTGC GGCGCAATGC AGCCAGGGCA
TTAGGGAAAT TGGGCGATCG TAAAGCCGTA CCAGGCTTAA TTAAGTGCTT GGATTGTCCT
GACTTTTACG TGCGTGAAGC AGCAGCCCAA TCTCTGGAAA TGCTCAAAGA TAAAGCAGCA
GCACCAGCAC TCATCAAATT ACTGGATGGG GGAGTCGCAC AGGCCGTGCA AGTAACAGGG
CGACCTCATC TAGTCCAACC CTACGAAGCA GTATTAGAAG CGTTAGGAGC TATTGGTGCT
ACTGATGCCA TTCCTCTGAT TCAGCCATTT CTAAAGCATC CAGTCTCACG AGTGCAGTGC
GCCGCAGCTA GAGCAATGTA TCAACTGACA CAAGAACCAG TATATGGAGA GCTGCTGGTA
AAAGTGTTAG AAGGTAATGA CCTCAACCTA CGACGAGTTG CTTTGGGAGA TTTGGGTGCA
ATTGGATACT TGGCAGCAGC AGAAGCGATC GCCAACGCCA AAGCCGAAAA CAGCTTCAAA
CTCATAGCCC TCAAAGGATT GCTAGAACAT CAGATGTCAG CAGAGTCAAA CGCCCTCTCA
ATATCTGATC AAGCTATCCG GGTCATGAAG CTCATGGATT CATTGTTGTA G
 
Protein sequence
MIEPSVEEFP ADNGPQLTPE LAIANLQSSD LSLRYYAAWW IGKYRVKEGA AVDGLIAALE 
DEADRTELGG YPLRRNAARA LGKLGDRKAV PGLIKCLDCP DFYVREAAAQ SLEMLKDKAA
APALIKLLDG GVAQAVQVTG RPHLVQPYEA VLEALGAIGA TDAIPLIQPF LKHPVSRVQC
AAARAMYQLT QEPVYGELLV KVLEGNDLNL RRVALGDLGA IGYLAAAEAI ANAKAENSFK
LIALKGLLEH QMSAESNALS ISDQAIRVMK LMDSLL