Gene Ava_2928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2928 
Symbol 
ID3681357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3634158 
End bp3634919 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content42% 
IMG OID637718275 
ProductHEAT repeat-containing PBS lyase 
Protein accessionYP_323434 
Protein GI75909138 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.71825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACATCTG AACCAATTCT TTCTCCAGAA ACAGCGATCG CTGCTTTATC TGATGAGGAT 
AACCAAATTC GTTATTATGC TGCTTGGTGG TTGGGTAAAC ATAACGTACA GGCTGGTTGT
ACAGCGCTAT GTGCAGCCTT ATTTGATGAA CGCTATCGCA TCCCACTAGG AGGGTATCCT
CTGCGTCGTC AGGCTGCACG GGCCTTAGGA ATGTTGAAAA ATCCCCAAGC TGTACCAGCG
TTAATTGCAG CATTAAAATG TGATGAAGAT TTACGTCTCA GGGAAGCAGT AATTTGCTCT
TTAGCGGCGA TCGGTGACAA ACGAGCTGTG ATTCCTTTGC TCAATCTTTT GCAATCAACT
CAAGCACAAC CTTATGAAGC TTTAATCGAA GCTTTAGCTA CTCTACAAGT TTGGTCAGCC
CGTCCACAAA TTGAACCTTT TCTGAAGCAT TATTCTGAGC GTGTGCAATG TGCAGCTGCT
CGATATTTGT ACCTGCTAAC CCAAGAATCT GAATACATTG AACGTATTGT CAAAAATCTC
AATCACGACA ATATGTATTT ACGTTGGGCG GCGGTATTTG ACTTGGGTGC AGTTGCTCAT
CAACAGGCAG TACAGGCAAT CTTAGCGGCT CAGGTTCCTA ATAGCTTAAA GCTCTTAAAT
TTAAAGCGTA TTCTTGAAGC TATGTTGAAC AACAATAGTG TTAATCAGGA AAAAGCATCT
GTATTATTTG GAGCAATTGA TGATTTATTA ATTCAACTTT AA
 
Protein sequence
MTSEPILSPE TAIAALSDED NQIRYYAAWW LGKHNVQAGC TALCAALFDE RYRIPLGGYP 
LRRQAARALG MLKNPQAVPA LIAALKCDED LRLREAVICS LAAIGDKRAV IPLLNLLQST
QAQPYEALIE ALATLQVWSA RPQIEPFLKH YSERVQCAAA RYLYLLTQES EYIERIVKNL
NHDNMYLRWA AVFDLGAVAH QQAVQAILAA QVPNSLKLLN LKRILEAMLN NNSVNQEKAS
VLFGAIDDLL IQL