Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2928 |
Symbol | |
ID | 3681357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3634158 |
End bp | 3634919 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637718275 |
Product | HEAT repeat-containing PBS lyase |
Protein accession | YP_323434 |
Protein GI | 75909138 |
COG category | [C] Energy production and conversion |
COG ID | [COG1413] FOG: HEAT repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.71825 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACATCTG AACCAATTCT TTCTCCAGAA ACAGCGATCG CTGCTTTATC TGATGAGGAT AACCAAATTC GTTATTATGC TGCTTGGTGG TTGGGTAAAC ATAACGTACA GGCTGGTTGT ACAGCGCTAT GTGCAGCCTT ATTTGATGAA CGCTATCGCA TCCCACTAGG AGGGTATCCT CTGCGTCGTC AGGCTGCACG GGCCTTAGGA ATGTTGAAAA ATCCCCAAGC TGTACCAGCG TTAATTGCAG CATTAAAATG TGATGAAGAT TTACGTCTCA GGGAAGCAGT AATTTGCTCT TTAGCGGCGA TCGGTGACAA ACGAGCTGTG ATTCCTTTGC TCAATCTTTT GCAATCAACT CAAGCACAAC CTTATGAAGC TTTAATCGAA GCTTTAGCTA CTCTACAAGT TTGGTCAGCC CGTCCACAAA TTGAACCTTT TCTGAAGCAT TATTCTGAGC GTGTGCAATG TGCAGCTGCT CGATATTTGT ACCTGCTAAC CCAAGAATCT GAATACATTG AACGTATTGT CAAAAATCTC AATCACGACA ATATGTATTT ACGTTGGGCG GCGGTATTTG ACTTGGGTGC AGTTGCTCAT CAACAGGCAG TACAGGCAAT CTTAGCGGCT CAGGTTCCTA ATAGCTTAAA GCTCTTAAAT TTAAAGCGTA TTCTTGAAGC TATGTTGAAC AACAATAGTG TTAATCAGGA AAAAGCATCT GTATTATTTG GAGCAATTGA TGATTTATTA ATTCAACTTT AA
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Protein sequence | MTSEPILSPE TAIAALSDED NQIRYYAAWW LGKHNVQAGC TALCAALFDE RYRIPLGGYP LRRQAARALG MLKNPQAVPA LIAALKCDED LRLREAVICS LAAIGDKRAV IPLLNLLQST QAQPYEALIE ALATLQVWSA RPQIEPFLKH YSERVQCAAA RYLYLLTQES EYIERIVKNL NHDNMYLRWA AVFDLGAVAH QQAVQAILAA QVPNSLKLLN LKRILEAMLN NNSVNQEKAS VLFGAIDDLL IQL
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