Gene Ava_2922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2922 
Symbol 
ID3681390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3627414 
End bp3628196 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content46% 
IMG OID637718269 
Producturoporphyrin-III C-methyltransferase 
Protein accessionYP_323428 
Protein GI75909132 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0007] Uroporphyrinogen-III methylase 
TIGRFAM ID[TIGR01469] uroporphyrin-III C-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.215743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0409844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCA CAGACAATGA GGGGCAAAAG AGTTTGGGTA AGGTCTATTT AGTAGGTGCG 
GGGCCAGGCG ATCCAGGACT GATGACGGTG AAAGGCAAAG GTATATTAGA ATGTGCCGAT
GTGGTCATAT ATGATGCTTT AGTCAGTCCA GCAATTTTGG CAATGATTAA TCCCCAAGCA
GAGCAAATTA ACGCTGGTAA GCGCATGGGG AGACATTCCC TATTGCAGGA CGAAACAACT
CAACTACTAA TTGAACAAGC CCAAAATCAT GCTGTTGTTG TGCGCTTAAA AGGTGGCGAC
CCCTTTATTT TCGGTCGTGG TGGGGAAGAG ATGGCTGATT TGATTGCGGC TGGGGTTCCG
GTGGAGGTTG TACCAGGTAT TACATCGGGA ATTGCAGCGC CAGCCTATGC GGGGATTCCC
TTAACTCATC GCTTGTATAG TTCATCTGTG ACTTTTGTAA CTGGACATGA GTCGGCGGGT
AAGTATAGAC CGAAAGTCAA TTGGCAAGCG ATCGCCCAAG GTTCGGAAAC GATTGTCATT
TATATGGGTA TCCACAATCT ACCTTACATT GTGGAACAGT TGAAGACGGC TGGGTTGAGT
TTAGCAACAC CAATTGCTTT AGTACGTTGG GGTACACGTC CCGAACAAGA AGAATTAATT
GGTGAGTTAG GGACAATTAT AGAACTAGTG GAGAAAACCG GATTTGAAGC GCCAGCGATC
GCAGTCATTG GCTCTGTTGT CAATATGCAC AGTATTTTAT CTGTAGCAGG TCGTGTTCAT
TGA
 
Protein sequence
MNRTDNEGQK SLGKVYLVGA GPGDPGLMTV KGKGILECAD VVIYDALVSP AILAMINPQA 
EQINAGKRMG RHSLLQDETT QLLIEQAQNH AVVVRLKGGD PFIFGRGGEE MADLIAAGVP
VEVVPGITSG IAAPAYAGIP LTHRLYSSSV TFVTGHESAG KYRPKVNWQA IAQGSETIVI
YMGIHNLPYI VEQLKTAGLS LATPIALVRW GTRPEQEELI GELGTIIELV EKTGFEAPAI
AVIGSVVNMH SILSVAGRVH