Gene Ava_2921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2921 
Symbol 
ID3681389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3626704 
End bp3627417 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content43% 
IMG OID637718268 
Productcobalamin (vitamin B12) biosynthesis CbiX protein 
Protein accessionYP_323427 
Protein GI75909131 
COG category[S] Function unknown 
COG ID[COG2138] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.03619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0371299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCTG CTTATCTGCT TGTATCCCAC GGCAGCCGAG ATCCACGTCC AGCGATCGCT 
ATGCAGCAAA TAGCAGGACT GATGGCTGAA AAATTACATC TTCCAGAAAA GTTAGTGGGA
ACAGGATATT TGGAGGTGGT TTCTGAACCT TTGCATGAGC AGATCAGAAA TTTTGCTCAA
ATTACTGTAG CTTGTGGGTG TCATCATCTG AAAATTATAC CTTTGTTTCT GTTTCCGGGT
GTTCATGTGA TGACGGACAT TCCTAGTGAA GTAACACAGG CGCAACAGGC TGTAGGTAAA
GATATGCTGA TTGAATTACA GCCATACTTG GGCAGTCATC CGGGTTTACC AATATTTCTC
CAAAAGCAAA TCGCTACTAT AAAAGCACAA GCGTGGATTT TGTTATCTCA TGGTAGCCGT
CGCCCAGGTT CTCAAAAACC AGTGGAAACA ATGGCGACAT ATATAGGCGG AGTGGCTGCT
TACTGGTCTG TGGCTCCTAG TTTAGAGTCA AGAGTTCAAG AATTGATTGC TATCGGTTAC
AAAGAAATTG CAATTTTGCC ATACTTTCTA TTCTCCGGCG GCATAACTGA TGCGATCGCT
CAAGCGGTTG AAGCGCTAAA ATTACAATTT CCTGGGGTAA GTTTATACTT GGCTGAACCT
TTGGGAGTTA GTGGAGAATT AGCCGATTTA ATTGGGGATT TGATTTACAC ATGA
 
Protein sequence
MTSAYLLVSH GSRDPRPAIA MQQIAGLMAE KLHLPEKLVG TGYLEVVSEP LHEQIRNFAQ 
ITVACGCHHL KIIPLFLFPG VHVMTDIPSE VTQAQQAVGK DMLIELQPYL GSHPGLPIFL
QKQIATIKAQ AWILLSHGSR RPGSQKPVET MATYIGGVAA YWSVAPSLES RVQELIAIGY
KEIAILPYFL FSGGITDAIA QAVEALKLQF PGVSLYLAEP LGVSGELADL IGDLIYT