| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2908 |
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| Symbol | |
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| ID | 3681413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 3613066 |
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| End bp | 3615249 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637718253 |
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| Product | lipopolysaccharide biosynthesis |
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| Protein accession | YP_323414 |
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| Protein GI | 75909118 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000198552 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCCAC CAATTGTTAA GAGCTATATT ATTGCTTTTG AAAAATATAA ATGGATTGGA
TTAGCCAGCT TTGCTTTAGT TGTAGCGGGG TCAACAGTGG TGGCTATCCA ACCAGAACCA
GCACCTACTT ATACAGCAAG CGGCACACTG ACATATTCTC GACCCCCGGT ATCATTTTCT
ACGACAGGTA GCGAAATTCA GCAACAAGGT CAGGAATTAA ACCAGGAAGT TCTGCTATCA
GATCAAGTAA TTGATAATGT GTCGGCAAAG GTGAAGATTC CGTCAAGAAG AATTGCTTCC
AGCGTAGCGA TTACACCGCC GAGAAGAAAC TCACGTACTG GAGAATTAGA ATCTAATGTC
ATTTCTCTGG CATATAAAGA TAGTGATCCC AAGCGGGCGC AGGAAATATT GCTGGAGCTG
ATGCAGGCAA TGGTCAAGCT CAGTAGTGAT ATTAATACTG GGCGACTAAA AGCTATTATT
GGCAAAATCA ATGAACGGAT ACCACAAGCA AGGTCTGAGC TACAAGCAGC CGAAAAAAGA
TTGGAACAGT ACGATCGCCG GGAAAGACCT GCTATATTAG CCGCAGAAAA TGGTAGTTTA
CTTGGTGCTG TTACTGGTAG CCAAAATCAG CAACGGGTAA TTCGCCAAAC TATTACGGGA
ATTGAGGCGC AGATTTTCAG CTTGCAAGAT AAGTTGGGTT TAGATGTCGG TCAATCTTAT
GTTTCTTCGG CGTTGAGTGC TGACCCAATT ATCGCCAACT TGCGATCGCA AATTTATCAG
ACAGAATCAC AAATCGCTTT ACTTCGTAAA GATTTGCGCC CAGAACACCC AAATATGATT
CAGTTGCAGC GTCAAAAACA AGCATCTGAA GAATTACTCC AACAAAGGGC GGCGGAAGTA
ATTGGCGGTG GTGGTACAGC AGCACCCTTA GCAACAAATA TTAGTGGTAT CCGCGCCCAA
AGTAGTTTAG ATCCAGCCCG ACAGCAGCTA GCTAACCAGA TGGTAGCTTT GCAAACGCAA
AAAGAAACCC TACAACAACA ATTAGCCCAG CAAATACGAG ATGAAATCCG GCTGCGGCAA
GAATATTCCC AAATACCCAA CAAACAATTA GAGCGATCGC GCTTAGAACA AGCAGTAGGG
CTGAAGAAAG CAGTTTATGA TCAAATGCAA GCCAAGCTCA CCGATGCTCA AACAGCCGAA
GCAGAGACAG TAAGCAGCTT TAGCATTGCT CAACCCCCCG TGGTAGCGGC TGATGCCAAA
AAACCCAAAA GTGTACCTTT AACCTTGGGG GTAGGTGGTT TCTTAGGATT GATAGTCGGT
GGTGGGGTGA TTTTCTTACT AGGTTCCTTG GAAGGAACAC TCCGCACCAG AGAAGCTATC
AGAGACAGCC TCAAACAACG GGATGTGGCA ATGTTGGGAG AAATACCTGT ATTGCCAGTG
GATGATTTAC CACCGGAAGC TCTACCTGTC ATCCTTTCTC TAGATTCTTT GTATTTAGAG
TTTTATGAGA AATTACGCAG TAACTTAAGG CGCATTGGTG GTAGAAACTT AAAAGTGGTT
TTGGTAACTA GTACTAGTAG CCAGGAAGGT AAAACAACCA GCGCTTATAA CCTGGGTATA
GCCTCCGCCC GCGCTGGCAA AAGAACCTTG ATCATTGAGA CAGATTTGCG ATCGCCTTCA
CGTTCCACCT CTTTGAGAGT TTCTCCCGAC GAGGATGCCA CACTTGAACC CCTGCGTTAT
TATGGCAGCT TAAGTGAATG TATTCGCTTA GTCCCTGAAG TCGAAAATTT ATACATCATC
CCTAGCCCTG GGCCTGTGCG TCAATCTGCC GCTATTTTAG AATCTAGCGA AATGCGGCGG
CTCATGGAAG ATGTGAGAGA ACGCTATGAT TTAGTTATTT TAGATACTAG TCCGTTAAGT
GTATCTAATG ACCCCTTGTT AATTCAACCC TATAGTGATG GCATAGTACT CGTATCACGA
GTTAACTATA CACAAGACAG TATGATGGCT GAAGCCATTG ATCAACTAGT GGAAGCAGAA
CTAGGACTAG TGGGAGTTAT TATCAACGGG GCTGATATCA CCGTTTCTTT ACCACCCTCG
GCTGAATTCT CCGATTCAGT ACCTGGGGAA GAACGGACAA GAGATGAAGA GTCAGAAATT
TCTGTTGGTG TAAGCAATAA CTAG
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| Protein sequence | MTPPIVKSYI IAFEKYKWIG LASFALVVAG STVVAIQPEP APTYTASGTL TYSRPPVSFS
TTGSEIQQQG QELNQEVLLS DQVIDNVSAK VKIPSRRIAS SVAITPPRRN SRTGELESNV
ISLAYKDSDP KRAQEILLEL MQAMVKLSSD INTGRLKAII GKINERIPQA RSELQAAEKR
LEQYDRRERP AILAAENGSL LGAVTGSQNQ QRVIRQTITG IEAQIFSLQD KLGLDVGQSY
VSSALSADPI IANLRSQIYQ TESQIALLRK DLRPEHPNMI QLQRQKQASE ELLQQRAAEV
IGGGGTAAPL ATNISGIRAQ SSLDPARQQL ANQMVALQTQ KETLQQQLAQ QIRDEIRLRQ
EYSQIPNKQL ERSRLEQAVG LKKAVYDQMQ AKLTDAQTAE AETVSSFSIA QPPVVAADAK
KPKSVPLTLG VGGFLGLIVG GGVIFLLGSL EGTLRTREAI RDSLKQRDVA MLGEIPVLPV
DDLPPEALPV ILSLDSLYLE FYEKLRSNLR RIGGRNLKVV LVTSTSSQEG KTTSAYNLGI
ASARAGKRTL IIETDLRSPS RSTSLRVSPD EDATLEPLRY YGSLSECIRL VPEVENLYII
PSPGPVRQSA AILESSEMRR LMEDVRERYD LVILDTSPLS VSNDPLLIQP YSDGIVLVSR
VNYTQDSMMA EAIDQLVEAE LGLVGVIING ADITVSLPPS AEFSDSVPGE ERTRDEESEI
SVGVSNN
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