Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2891 |
Symbol | |
ID | 3681396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 3590932 |
End bp | 3596076 |
Gene Length | 5145 bp |
Protein Length | 1714 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637718236 |
Product | WD-40 repeat-containing protein |
Protein accession | YP_323397 |
Protein GI | 75909101 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | [TIGR01543] phage prohead protease, HK97 family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00238858 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTTGAAG GACACCCAGC AGTAGATATT AAAGTAGCGA ATGAGCGTGC TTTCACAAGT TTATGGAGAG CGATCGCTCT TTCTCATGGT AATTTTTCTG TAGCTTTGGT TTACTGTAAT TATCGAGTCT TGCAGGAGAA AATATTGCAA CGACTAGATG AAATGTTTGC TGAGAATCCC GTTCAAAAAG TTGTCTTACC TCCTAATACC AGAAGTCTTT ATACAACTCT CCATTTAAAT TTACTCCCCC AACAGCAACA GCCATCAGCC TTGATGGTTT TGGGTTTAGA ATCAGTCGAG GAAATTGACG ATTTACTCAG AGCCATTAAT CATATTCGAG ATGAATTTCC CAAACGTCAT TCATTTCCGA TGATTTTTTG GGTGAATGAA GAAGTCTTGC AAAAAGTCAT CCGTTTAGCG CCGGATTTTG CCAGTTGGGC GGCGACACCG ATTCGGTTTG AGATGACAAC ACCAGAGTTG TTGCAATTTC TCCAACAGGA AACCGACTCT TTATTTGCCA GAGTCTTACC CAAGGATATG GGACAACCCC AACAGCCTCA ATTCGGTGAT GATTACTCTA CCTTAGAGCA GGTATGGGAA CACAGTAATG AACTGCACTA CGCTATTGCG GAACTCCATG AGAGGGGTAT TACCTTAGAA CCAGAATTAA ACGCTAGTTT AAAATTTGTG TTTGGCTTAG ATGATTATGT CAGCGATCGC ATTCATCATG CCTTAAATCA TTTTCAACAA AGTCTGCAAA TTTGGCAACG ATTGGGGGAT TGGGGATTGG GGACTGGGGA ACAGAGTATA TCTTTTCCTG TTCGTCCTAC TCCTTTATCT TCCCCAATTC TTAGACAGGG AGTTTTGCAA TTATATATAG GGTTATGTTA TTGCCGTTTA GCGGAGCAGA ATCAGCTAGA TAATCGTCGT CATTGGGAAA CAGCAAAATT CTATTTTCAA GAATGTTTGG AGATTTTGCA GGTAGCTGGA AGGCCAGATA TAGCATCGGA ATTTATTGGT CAACTGGCGG AAGTTTTGGA ACATCTGCAA GGATGGGATG AACTACAAAC CGTTGCAGAG ACAGCACTGG AGTTACATCA TACCTACGGT AGTCAAATTC AACTGGCTTG CGATTATGGT TTCCTGGCCC AGGTGGCGTT ACAGCAGTCG CGCTGGGTGC AGGCGAGTAT TTTGGCACAC GTATCACTAT TAAAATTAAC TGAGGCGCAA AACCATAACG ATAGTGACCG TCATCATTGC CTATTTCCCT TACTGTTGGC ACAAATATAT TATCTAGTTT TAGCCAAAGC CCAACAAAAC TTAGGTGAAC CAGCAGTTGC ACAGGAATAT TTAGATAAAG CAGCCAAAGA ATTACCAGCC GCTTTAGAAA ATAGCACCCA TCAATATGAC GCTCATCGTT ATATTAGAAT GCTGCGGACA TTGCGATCGC TCTATTTTGA AGCAGGTAGA TATCTAGAAG CTTACCGCAT CCGCCAAAAA CGCCGCTCTG TAGAACAGCA ATATGGTTTT CGGGCTTTTA TTGGTGCGGG AAGATTGCAA CCCCAAAGAC AAGCAACCAA CCCCGCTTTG ATGTCACCCT CTGGTAGCAG TACTGTAGCC TTAGAAATCG CCGCTTCCGG TCGAGAACAA GATATAAATA ACTTAATCGG CAGAATTAGC CGGGCTGACC AAAAATTGAT CGTGATTCAC GGCCCTTCTG GAGTGGGGAA GAGTTCCACT GTGACAGCTG GTTTAGTCCC AGCGTTACAA AATCGAGCGA TTGGTGATCA AATTGCCATG CCCGTAGTAT TGCAAGTATA CACCGATTGG GTACGGGAAT TAGGAAAGGC TTTAACTGAG GCTGTGGCGC ATATTTCCGG AGATGTCAGC ATTACGCCGG AGATTTTATC CACACCGACA CCAGCGATGG ATGTGGGCTA TGCTCGATCG ATGGCGATCG CTGATATATT AGGACAATTA CGCCAAAATG CCAATAACCA CCTGATCACG GTGCTGATTT TCGACCAGTT TGAAGAATTC TTCTTTGGTT ATAGCGATGG CGTTCCGCCC ACCGTAGGTG ATCGTCAACA AAAGAAAGAA TTTGATCAAT TTCTCAGTCA ATGTCTGAAT ATATCCTTTG TCAAAATCAT TTTTTCCATC AGAGAAGATT ATTTACACCG CTTATTAGAA TTTAAACATC TTTCCTACCT GGAAGCAGTT AATAATAACA TCCTTGATAA ACAAATCCGT TATCAATTAA ATAATTTTTC CCCAGAATAT GCTAAAGTCA TCATTCAAAA ATTAACAGCA CGTTCTCAAG TCAATTTGGA ACCAGCTTTA ATTGATGCAG TAGTGGAAGA TTTATCAACT GAATTAGGGG AAGTCCGCCC CATTGAATTG CAGGTAGTTG GCGCACAAAT CCAAGATGAG CGCATTAATA CCTTAAAACA ATATCAGCAA TATCGACCAA ATAAACTCAT AGAAAGATAT ATCAAAGAAC TGATCAAAGA GTGTGGCCCT GACAATGAGC GTGCAGCTTT ACTTGTTTTA TATTTGTTGA CAGATGAAAG CAACAAACGA CCTTTTAAAA CCCGTGCCGA ATTAGCTATT GAATTGGCAG AATTAGAAGA CCCTGAAAAA TTAGATTTAG TCTTAGATAT TTTAGTTAAC TCTGGCTTAG TTGTCTTGTT TCCTGATATT CCCGAACGTT ATCAACTTAT TCATGATTAT TTAGTCGATT TGATTCGCTA TCTCCAACAA CAGGAATCCA GCTTACAAGC ACAACTTGAC CAACTACGCC ATAAAGTCCA ACAAAGTCAA ACGGAAATTG CCCGCCTTAA AAGCGAACTC AGCCAAAAAA AGCAATCTAA ACTCACAGAT ACTCATCTCC AACAAGGTTT GGATTTAGTC ACAGAACTAC GGGAATTACG CAAGCGAGAA GAACTAACTC AACTAGAAAT TGAACAATTA CGTGCTGAAC TCAAAGAAAA GGAATTAACC GCCCAACTAG CCGAAAGCCA GAAACAACAA AGGCTCAGCC AAGCCAAGCT CAATCGTTCA CTAAAAATTG CCCTGGCTGC CTCATGTCTC GCCATCTTGG GGTTAAGTGT TTCTATTATT ACAGCAGTAG ATAGCGAAAT TAAAACCCTC AGCGTCTCCA GCGAAGCCCT GTTTGCTTCC CAAAAAGGTC TTGATGCGGT GAAAGAAGGT GTCAAAGCCG CCAGAAAACT GCAACGGGCT ATTTGGGTAG ACCCTTACAC CAGAGAACAG GTGCAAACAG CACTCTATCA AGCCGTTGTG GGAGTGAGGG AATACAACCG TTTAGACGGG CATACCGCAG GGGTAAACAG TGCGGTCTTT AGCCCCGATG GTTCCCTGAT TGCTTCCGCC AGTGCCGATA ATACTATCAA TCTCTGGCGT AATGATGGCA GCTTAATCAA CACCTTATCC AAACATACTA ATGTAGTAAA TAGTGTCAAC TTCAGCCCTG ATGGCTTGTT AATTGCCTCT GCTAGCCAAG ACAAAACCGT CAAACTATGG AACCGAGTCG GTCAACTAGT AACCACCTTA CAAGGGCATA GAGATGTAGT AAATAATGCT AGTTTTAGCC CCGATGGTTC CCTGATTGCT TCCGCCAGTA GCGACAAGAC GGTAAAACTA TGGAGTCGAG AAGGGAAATT ACTCAAAACT TTATCAGGCC ATAATGATGC AGTTTTGGGC ATAGCTTGGA CACCAGATGG TCAAACTCTC GCTTCTGTAG GTGCTGACAA AAACATCAAC TTTTGGAGTC GGGACGGTCA ACCACTCAAA ACCTGGAAAG GACATGATGA TGCAATCTTG GGTGTAGCTT GGTCGCCCAA TGGTGAAATA CTCGCCACCG CCAGTTTTGA TAAGACTATT AAACTGTGGA ATCGCCAAGG TAATTTATTA AAAACCCTAT CAGGACACAC GGCGGGAGTC ACAGCCGTCA CCTTTAGCCC TAACGGTCAA ACTATCGCTT CCGCCAGTAT CGATGCAACC CTCAAACTTT GGAGTCCTGG CGGTCTGCTG TTGGGAACCT TAAAGGGTCA TAACAGTTGG GTAAATAGTG TCAGTTTTAG CCCTGACGGT CGCACCTTCG CCTCTGGTAG CCGAGATAAA ACGGTGACAC TCTGGCGCTG GGATGAAGTG CTATTACGAA ACCCCAACGG CGATGGTAAC GACTGGGTGA CAAGTATTAG CTTTAGTCCT GATGGTGAGA CTTTGGCGGC GGCGAGTCGA GACCAAACTG TAAAAATTTT ATCTCGGCAA GGGAAACTAT TAAACATCTT CAAAGGGCAT ACAGGGTCAA TTTGGGGCGT AGCATGGTCG CCAAATCAGC AGATGATAGC CTCAGCCAGT AAAGATAAAA CAGTGAAATT ATGGAATCGA GATGGCAAAT TATTACATAC CTTACAGGGT CATCAAGATG CAGTCTTAGC TGTAGCCTGG TCGTCGGATA GTCAGGTAAT AGCTTCTGCC AGTAAAGATA AAATGGTGAA AATCTGGAGT CAAGACGGGC AACTACTCCA CATCTTACAA GGTCACACCG ATGCAGTCAA TTGGGTCAGC TTTAGCCCTG ATGGTAAGAT ATTAGCCTCC GTCAGCGATG ATACCACCGT GAAATTATGG AATCGAGACG GGCAACTACT CCACACCCTC AAGGAACATA GCCGCCGAGT GAACGGGGTA GCATGGTCGC CAGATGGACA AATTGTAGCT TCTGCCAGCA TCGACGGGAC AGTTAAACTG TGGAATCGAG ACGGTAGCTT GTTAAGAAAT CTACCGGGTG ACGGTGATAG TTTTATTAGT GTTAGTTTTA GCCCCGACGG TAAGATGTTA GCGGCTAATA GTGATGATAA AATCAGGCTT TGGAACCAGA AAGGCACATT GCTGATGGTT TTAAAAGGCG ACAAAGATGA ATTAACCAGT GTTACCTTCA GTCCCGACAG TCAAATTTTG GCAGCAGGCG GCGGCAATGG TAAAGTGATT TTCCAGAATT TAGCTGATAT TAAACTCGAA AATTTACTAG TACGCGGGTG TGATTTACTA CAAGATTATT TAAAAACTAA TCTGGATGTG ACAAAAAGCG ATCGCACCTT ATGCCCCAAT ACTAACAACA GGTGA
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Protein sequence | MVEGHPAVDI KVANERAFTS LWRAIALSHG NFSVALVYCN YRVLQEKILQ RLDEMFAENP VQKVVLPPNT RSLYTTLHLN LLPQQQQPSA LMVLGLESVE EIDDLLRAIN HIRDEFPKRH SFPMIFWVNE EVLQKVIRLA PDFASWAATP IRFEMTTPEL LQFLQQETDS LFARVLPKDM GQPQQPQFGD DYSTLEQVWE HSNELHYAIA ELHERGITLE PELNASLKFV FGLDDYVSDR IHHALNHFQQ SLQIWQRLGD WGLGTGEQSI SFPVRPTPLS SPILRQGVLQ LYIGLCYCRL AEQNQLDNRR HWETAKFYFQ ECLEILQVAG RPDIASEFIG QLAEVLEHLQ GWDELQTVAE TALELHHTYG SQIQLACDYG FLAQVALQQS RWVQASILAH VSLLKLTEAQ NHNDSDRHHC LFPLLLAQIY YLVLAKAQQN LGEPAVAQEY LDKAAKELPA ALENSTHQYD AHRYIRMLRT LRSLYFEAGR YLEAYRIRQK RRSVEQQYGF RAFIGAGRLQ PQRQATNPAL MSPSGSSTVA LEIAASGREQ DINNLIGRIS RADQKLIVIH GPSGVGKSST VTAGLVPALQ NRAIGDQIAM PVVLQVYTDW VRELGKALTE AVAHISGDVS ITPEILSTPT PAMDVGYARS MAIADILGQL RQNANNHLIT VLIFDQFEEF FFGYSDGVPP TVGDRQQKKE FDQFLSQCLN ISFVKIIFSI REDYLHRLLE FKHLSYLEAV NNNILDKQIR YQLNNFSPEY AKVIIQKLTA RSQVNLEPAL IDAVVEDLST ELGEVRPIEL QVVGAQIQDE RINTLKQYQQ YRPNKLIERY IKELIKECGP DNERAALLVL YLLTDESNKR PFKTRAELAI ELAELEDPEK LDLVLDILVN SGLVVLFPDI PERYQLIHDY LVDLIRYLQQ QESSLQAQLD QLRHKVQQSQ TEIARLKSEL SQKKQSKLTD THLQQGLDLV TELRELRKRE ELTQLEIEQL RAELKEKELT AQLAESQKQQ RLSQAKLNRS LKIALAASCL AILGLSVSII TAVDSEIKTL SVSSEALFAS QKGLDAVKEG VKAARKLQRA IWVDPYTREQ VQTALYQAVV GVREYNRLDG HTAGVNSAVF SPDGSLIASA SADNTINLWR NDGSLINTLS KHTNVVNSVN FSPDGLLIAS ASQDKTVKLW NRVGQLVTTL QGHRDVVNNA SFSPDGSLIA SASSDKTVKL WSREGKLLKT LSGHNDAVLG IAWTPDGQTL ASVGADKNIN FWSRDGQPLK TWKGHDDAIL GVAWSPNGEI LATASFDKTI KLWNRQGNLL KTLSGHTAGV TAVTFSPNGQ TIASASIDAT LKLWSPGGLL LGTLKGHNSW VNSVSFSPDG RTFASGSRDK TVTLWRWDEV LLRNPNGDGN DWVTSISFSP DGETLAAASR DQTVKILSRQ GKLLNIFKGH TGSIWGVAWS PNQQMIASAS KDKTVKLWNR DGKLLHTLQG HQDAVLAVAW SSDSQVIASA SKDKMVKIWS QDGQLLHILQ GHTDAVNWVS FSPDGKILAS VSDDTTVKLW NRDGQLLHTL KEHSRRVNGV AWSPDGQIVA SASIDGTVKL WNRDGSLLRN LPGDGDSFIS VSFSPDGKML AANSDDKIRL WNQKGTLLMV LKGDKDELTS VTFSPDSQIL AAGGGNGKVI FQNLADIKLE NLLVRGCDLL QDYLKTNLDV TKSDRTLCPN TNNR
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