Gene Ava_2880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2880 
Symbol 
ID3681444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3578370 
End bp3579893 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content48% 
IMG OID637718225 
Producthypothetical protein 
Protein accessionYP_323386 
Protein GI75909090 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.232643 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCTT ACTCCACCAC TCCCGAAACT CAACCAAAAC CCCTAACCCA CCCCGAAGTA 
GATGCCTTTG ATTGGGAATC CCACATGGCT AAATTAGTGG GATTGGCAGC AGAACCCACC
AAAGAGGTGG CAGAGATAGC ACCAACAAAC CAGACATCCT CCGCACCACC ACAAGAGGTA
CAAACAGAGC AACCCCTCGC ATCTAACCCT TTTGCTAAAT TAGCCTTGGT AGGTACGGGT
ACTTTAGTCT TAGTCGTCAT AGCTGGCGGG TTTTTATCCC AGATCATGAG TGCTAACAAT
CAAAAGCCAA CACAGAATCC AGCAACTGTG TCTCAGCCTG AAGCCGCCGC CACCAACTTC
ACCCCAAAGC CAAACCTGGA ACAAGAAGTA GAAACTTTAA AAACTAAATT AGCACTGGCT
GAACAAACCC AGGCGGTAAA AGTCGCCCAG CAAAATCTCA GAAATGCTGC CAGGGTTTCC
GTTCCCCAAA CAAACAATCC TGTTACACCG TTAGCATCGC CAACAACGTC TACATCAGCA
CCCCGCACGG TTATTATTGA GCGTCCTGCT CAAAATCCCT ATCCACCTGC ACCGATGCCA
GTAGCCAGTT CTGCAAGTCC CCAACTACCG CCACCACCTT TAGCACAGCC AAATTCTGCA
CCCACCCCTC CCAACCCTTG GGAAGAATGG TCGAGGATGG CTAAGTTAGG TAGTTACGGC
CAGGCAAATG CTGTAGATCA ACCAAGTATG ACCGTCTCTA GTCCGCCGCC ACTTAATGTC
CCACGGCCGA CTACGAATTC TAATGGAGAA CAACCGCCAC AACCACCAAG TTCGCTGATC
AGCCAAAGGC AATCCCGTAG CCCACAATCA TTGAAGGTGG GAACTAGTGC TAAAGCAGTG
TTGGCAACAG CTGTTTTTGG AGAAACAACT AGAGGCAGAG GCAACAATGA CGACAACAAC
GAAAATAAAA ATTTGTTTGT TGTTCGCTTA AGAGAACCCC TCAAAAGCGT GGATGGAACG
ATCGCCTTAC CTGCCAACAC CGAGTTATTA ACTGAATTGC GATCGGTTTC CGAACAAGGG
GTGATGCAAC TCAACATCGC CAAAATGATT GTGGAGAATA ATGGCGAACT CTCGGAAAGA
GATATACCTA ACAATGCACT GGCAATTCGG GGGTCTAAAG GTTCTCCTTT ATTAGCACGC
CAATACCCTG ATCGTGGTTC ATCTATTGCG GGGATGGATG CAGGCTTGTT TATTTTAGGT
GGTGTGGCTA AAGCCGCAGA ATTATTTAAC CGTACAGAAT CCCAAATAAC GACTTCGACC
GGTGCTGGAA CTACAATCAG CAGCACCAAC CCCCAACGCA ACTTAGCGGC TGGAATTGTG
GAAGGTGGTT TAAACTCCGT CGTCCCGCAA ATTTCCCAGC GTAATCAACA GGCGATCGCC
CAAATGATGC AACAAACAAA TGTTTGGCTC CTTGGCGCTG GAACCGAAGT AGAAATTTAT
GTCAATCAAC CAATACAACT TTAA
 
Protein sequence
MTPYSTTPET QPKPLTHPEV DAFDWESHMA KLVGLAAEPT KEVAEIAPTN QTSSAPPQEV 
QTEQPLASNP FAKLALVGTG TLVLVVIAGG FLSQIMSANN QKPTQNPATV SQPEAAATNF
TPKPNLEQEV ETLKTKLALA EQTQAVKVAQ QNLRNAARVS VPQTNNPVTP LASPTTSTSA
PRTVIIERPA QNPYPPAPMP VASSASPQLP PPPLAQPNSA PTPPNPWEEW SRMAKLGSYG
QANAVDQPSM TVSSPPPLNV PRPTTNSNGE QPPQPPSSLI SQRQSRSPQS LKVGTSAKAV
LATAVFGETT RGRGNNDDNN ENKNLFVVRL REPLKSVDGT IALPANTELL TELRSVSEQG
VMQLNIAKMI VENNGELSER DIPNNALAIR GSKGSPLLAR QYPDRGSSIA GMDAGLFILG
GVAKAAELFN RTESQITTST GAGTTISSTN PQRNLAAGIV EGGLNSVVPQ ISQRNQQAIA
QMMQQTNVWL LGAGTEVEIY VNQPIQL