Gene Ava_2879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2879 
Symbol 
ID3681443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3577811 
End bp3578350 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content44% 
IMG OID637718224 
Producthypothetical protein 
Protein accessionYP_323385 
Protein GI75909089 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.704557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.175391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCTA AAAATAATTT TTCCCCCTTG TCTTTAGCTA CTTGGATTTT TTCTGGTGCG 
ATCGTTTTAC TGGGAAGTCG TGCTGTAGCT GAAAATTCTG TTCTGCGTTC TATTTTTTCC
TGCCAAGCAC AAGGTTTAGG TGGATTAGTC CCGACTATCA AAGTCTGGTA CGAACAAGGG
ACAAACCTGA GCTTTATTCC CGCAGGCGAA AAGATTCGCA AAGTTTGGTT AAATGACCCT
TCTCAGGTAA CACTAGACTT TGACGGCCCC ATGTGTATGC AGTTTGGCCC AGAAAGCGGT
GCTGATTGTA AAAACTCAGC CGCTAATGTT ATTCAACTGC GACGGATTCC TAAACTCAAT
CTTCCGGGTG TGCGGAGTAC CGACAATACA CTTTTAACAG TAATTACTGA AGCTCAAGGT
CAAAGTAAAC TTTATACTTT TAAAGTTCTT TATGAAGATA CCCCGCCGGA ATATCATACC
CTGGCTGTTT TCGCTGATCC CGGAGGTGGT GGGGCATCTT GCGCCAGAGT TTCTAACTAA
 
Protein sequence
MKAKNNFSPL SLATWIFSGA IVLLGSRAVA ENSVLRSIFS CQAQGLGGLV PTIKVWYEQG 
TNLSFIPAGE KIRKVWLNDP SQVTLDFDGP MCMQFGPESG ADCKNSAANV IQLRRIPKLN
LPGVRSTDNT LLTVITEAQG QSKLYTFKVL YEDTPPEYHT LAVFADPGGG GASCARVSN