| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2858 |
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| Symbol | |
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| ID | 3681461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 3549614 |
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| End bp | 3551167 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637718205 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_323366 |
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| Protein GI | 75909070 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit
[TIGR02971] ABC exporter membrane fusion protein, DevB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACTG AGACAACACA CCCCGTAGAT TCATCAATAT TGCTGCCACA GACCAAGAAA
AAAGCTAAAA TCAATTGGCT TTCTTGGCTG ATTGTCTTAG GGATTGTGGG TGGTATCGGC
TACGCAATTT ATTACCAATT AACAGTAGTT CCTCGTCAGC AAGCTAGAAG CAGGGTACTT
ACACAGGCTG TAGAAAGGCA GACTCTACCA ATTACAGTTT CCGCAAATGG AACCGTCAAA
CCTGAACGGT CAGTCAACCT CAGCCCGAAG AATTCTGGCA TACTCAAACA ATTGCTAGTC
AAGGAAGGGG ATGTTGTTAA ACAAGGGCAA GTTTTAGCCT ACATGGATGA TTCCAACTTG
CGAGGACAAC TGATCTCTGC ACAGGGGCAG TTAGCTCAAG CTGAGGCAAA CTTGCAAAAG
GTACAAGCGG GGAATCGTCC TCAGGATATC GGTCAATCTC AGGCTCAGTT AGATGAAGCC
TTGGCAAACT TACGTAAGCT AGAGACAGGT AATCGACCAC AGGATATTGC TCAAGCCCAA
GCACGCTTAA AAAGCGCACA AGCCAGCTTA ACTCAAGCAG AAGACGATTT ACGCCGGAAT
CAGCAACTTT ATAATGACGG GGCGATCGCT CTACAAGTCG TCAATCAAAA ACGTACAGAA
CGCGATAGCG CTCAAGCCCA AGTCAATGAA GCCCAGCAAG CATTGGCCTT ACAACAAGCC
GGCTCACGCC AAGAAGACAT CGAGCAAGCA AGGGCGACAG TCAGACAGAG ACAGGAAGCC
TTGGCGCTGC TAAAAGCGGG GAACCGCCGA GAAGATATTG ATGCAGCCAG AGCGCAGGTA
ACATCTGCCC GTGGTTCCCT ACAAAATACC CAAGCGCAAA TCAATGACAC CGTACTGCGT
GCGCCATTTG ATGGTATTGT GACCCAAAAA TACGCTGATC CAGGCGCTTT TGTTACACCC
ACAACCTCAG GAAGTGCTGT TTCTTCCGCC ACCTCTTCTT CAATTTTGGC GTTAGCCTCA
CGTAATGAAG TTGTAGCCAA TTTATCTGAA TCGAATATTG CCAAAATCCG GTTAGGTCAA
AAAGTGACAA TTACCGCAGA TGCCTATCCA GGTAGAACCT TTGAAGGTAA AGTCAGTCAG
ATTGCTGCTC AAGCCACAGT AGAGCAGAAT GTCACCAGTT TTCAGGTCAA AGTATCATTG
AGCGATTCTC AAAGATTATT GCGATCGGGG ATGAATGTGT CAGCAGAATT CCAAGCTGGT
CAATTAGATA ATGCTTTAGT AGTACCCACA GCCGCAGTTG TGCGCCGGGA AAATGCCACA
GGTGTTTTTG TCTCAGGAGC CAATAACCGA CCAGTTTTTA CTCCGATTAA AACTGGAGCG
ACTGTTAATA GTTTTACTGA AGTCCAATCT GGCTTGAAAG GTAACGAAAG AGTCCTGCTC
AGTTTCCCTC CAGGAATGCG ACCCCAATCA ACACCAAGAG GAGGAGTTTT TCCAGGGGTA
GGCGGCGGTG GTGGTCGTTC TTCCGGTGGT CGTTCGCGTA ACGCTGCACC TTAA
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| Protein sequence | MTTETTHPVD SSILLPQTKK KAKINWLSWL IVLGIVGGIG YAIYYQLTVV PRQQARSRVL
TQAVERQTLP ITVSANGTVK PERSVNLSPK NSGILKQLLV KEGDVVKQGQ VLAYMDDSNL
RGQLISAQGQ LAQAEANLQK VQAGNRPQDI GQSQAQLDEA LANLRKLETG NRPQDIAQAQ
ARLKSAQASL TQAEDDLRRN QQLYNDGAIA LQVVNQKRTE RDSAQAQVNE AQQALALQQA
GSRQEDIEQA RATVRQRQEA LALLKAGNRR EDIDAARAQV TSARGSLQNT QAQINDTVLR
APFDGIVTQK YADPGAFVTP TTSGSAVSSA TSSSILALAS RNEVVANLSE SNIAKIRLGQ
KVTITADAYP GRTFEGKVSQ IAAQATVEQN VTSFQVKVSL SDSQRLLRSG MNVSAEFQAG
QLDNALVVPT AAVVRRENAT GVFVSGANNR PVFTPIKTGA TVNSFTEVQS GLKGNERVLL
SFPPGMRPQS TPRGGVFPGV GGGGGRSSGG RSRNAAP
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