| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2856 |
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| Symbol | |
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| ID | 3681459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 3547598 |
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| End bp | 3548491 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637718203 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_323364 |
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| Protein GI | 75909068 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAAG AGGGCGGTAG TGTGCCTAAA CACGTTAGTT TGATTTCTCT TCTGGTTGTC
TGTGGTTTGT GGAGTATGCC CCAAGCAGCT CATGCACAGG CGTTGATACC TCATACATTG
CAACTAGATC CAGCAAAGTT GGAAAAGCAA GGGTTGAGTT TAGCCCAAGA AGCGGCTCAA
CTGGGGCAGT TCCAGCAGTA TGAATTGGCT TTAGCAAGAG CAAAATTGGC CAGCCAGTTA
GCTCCTGGGA ATGATAAAGT GTGGTTTCTC TTGGGTGGTT TGCAGTTGCA AACTAAAAAT
TTTGATGGAG CGATCGCATC TCTCAATAGA TCAAAAACAA TCAATCCCAA GAATGCTGAT
GTCTTGTTTG CTTTAGGCTC GGCTAATTTT CAACAAAAAA AATATCAAGT AGCTATTGAA
CATTACCAAG CTGGTTTGGC ATTGAAACCC AACGAAGCAG ATGGATTGTT TGATTTAGGA
AACGCCTATT ACATGATAGG ACGATTGCCA GATGCGATCG CTCAATACAA TAAAGCTGTA
GCCCAAGATA AAAAATTCTG GCCAGCAATT AACAATATTG GCTTAATCAG CTACGAACAA
GGTAACGTGG ACGAAGCCAT TAAGCGATGG CAATCTGCTG TTGCCATTGA TAAACAAGCC
GCAGAACCAT TGCTAGCTCT AGCAGTGGCT CTGTATACCA AAGGCGATCG CCAACAGGGT
ATATCTTTAG GAGAAGCCGC ACTCCGGATT GATCCGCGCT ATGCCAGCAT AGATTTTCTC
AAAGAAAATT TGTGGGGCGA TCGCTTATTG TCTGATACAA AACAATTCTT GGAATTACCG
CGCATCCAAG CAGCTTTAGG ACAGCGAGAA AGCGCACCTA CTCCTAGACA GTGA
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| Protein sequence | MAQEGGSVPK HVSLISLLVV CGLWSMPQAA HAQALIPHTL QLDPAKLEKQ GLSLAQEAAQ
LGQFQQYELA LARAKLASQL APGNDKVWFL LGGLQLQTKN FDGAIASLNR SKTINPKNAD
VLFALGSANF QQKKYQVAIE HYQAGLALKP NEADGLFDLG NAYYMIGRLP DAIAQYNKAV
AQDKKFWPAI NNIGLISYEQ GNVDEAIKRW QSAVAIDKQA AEPLLALAVA LYTKGDRQQG
ISLGEAALRI DPRYASIDFL KENLWGDRLL SDTKQFLELP RIQAALGQRE SAPTPRQ
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