| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2837 |
|---|
| Symbol | |
|---|
| ID | 3681479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 3512430 |
|---|
| End bp | 3514250 |
|---|
| Gene Length | 1821 bp |
|---|
| Protein Length | 606 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637718184 |
|---|
| Product | IucA/IucC |
|---|
| Protein accession | YP_323345 |
|---|
| Protein GI | 75909049 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4264] Siderophore synthetase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.296013 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.292104 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACCAT ACACAATTGC CAAACCAATC TCAGTGCTGG CGCAACATCG CACTGACAAA
GAAATTGCCG AACAAGCAAC AATTCACAGC TTTTTGAATT GCTATCTACG CGAAACCAAC
ACGGGTGAAA TCATCACCAC CGCGACAAAA GACGCTGATA TTTTAGAAGT TTTCCAAAAT
ACAAATACAA AATCGTTGTT TTGTTGTCAG TTAACACATC AAAATATCAG GCTATTAATT
GGTATAAGAT ATTATTCACA GACAGGCAGG CATTTATTTA CTTTTCCCCT TTATTATCAA
GTAGATCAAG GTAATTTACT TGAACTTGAT TACCTGACTC TAGCAACGCT CATTACTAAA
GAATTAGCCT TGACTGGTGG TAGCAATAGC CATCAAGATG AACTGATTTT GCGTGTGATT
CAAAGCTGTA ATCATGTTGA AAATTTTGTT CGGCAACGGC AACAAGATGT AGAAAAACTT
TATACTTTTA ACAGTAATTT CATCGCATCT GAACAAGCTT TAGTTTTTGG ACACCATTTA
CACCCCACTC CTAAAAGTCG GCAAGGTTTT GCTGACCATG AATTGTCAAT TTATTCGCCA
GAATTAAAAG GTAGTTTTCC TCTGCATTAC TTCCGCGTTC ATCAGTCGAT GGTACTGGAA
GGTTCGCAGC TATCACAGAC AGCAACAACA CTGATTAAAT CAGAATTATT GGCTGACGAA
AATGTTGATT ATCAATTCAA AAATACTTAT TGTGATGAAG ATGATTATGC TTTGTTACCC
ATACATCCTT GGCAAGCTAA TTACTTATTA CAACAGCCAC AAATTCAACA ATTGATTAAG
CAAGAAATAT TGCAAGATTT AGGTTTGGTT GGTCGAGCAT ATCAACCTAC ATCTTCAATT
CGCACTGTCT ATCATCCAGA TGCGGCATTT ATGTTAAAAT TGTCGCTGAA TATCAAAATT
ACTAACTCTG TCCGCACTAA TTTATATAAG GAGTTAGAAC GGAGTTTAGA AGTACATCAA
ATTTTAACTA GTGAAATCGG GCAACGACTA TATCAACGTT TTCCTGATTT CCAAATCATC
ACTGATCCTG CTTATATCAC TTTAAAAATT GATGGTGTTG CTGTTGATGG TTTCTCAACA
ATTCTGAGAG AAAATCCGTT TTTAAATAAT CCCCTGACGG ATGCAACTTG TGTAGTAGCT
TTGTGTCAAG ACTCTATTTT GGGTAACGGT TCACGATTAG CACGGATTAT TGAGGAACTA
GCACAACAAG AAAACCGTTC GACTGAGGCG GTGAGTTTGG ATTGGTGCAA CCGTTATTTA
CAGATTTACT TAGAGCCAAT TCTCTGGTTA TATTTCACTT ACGGTATAGG ATTAGAAGCC
CATCAACAAA ATAGTGTAGT GCAGTTAAAA GATGGCTATC CTGAGAGGTT TTTTTATCGG
GACAATCAAG GTTATTATTA CCGTCGTTCT TGTCATCAAT TGTTAGATCA TATTTTGCCG
GGGATTAGTC AAAAAAGTGA AACAATATGT GATGATGAGG TTATTGATGA ACGGCTTACT
TACTACTTGT TCTTTAATAA TTTATTCGGG CTAATTAATG CTTTTGGTGT AGCGGGATTG
ATAGATGAGA AATTACTCTT AGGGGAGTTG CGAAACATCT TAGGCAAATA TTCTGAACAT
TCTTTAGTGA ATAATTTACT TTCTCAGTCA CAATTGCTTT GTAAGGCTAA TCTGCTTACA
CGGTTTCATA ATCTGGATGA ACTTGTGGGG CCAGTTTCTA CACAGTCTGT CTATGTTGCT
GTTGATAATC CTTTGATGTA A
|
|---|
| Protein sequence | MTPYTIAKPI SVLAQHRTDK EIAEQATIHS FLNCYLRETN TGEIITTATK DADILEVFQN
TNTKSLFCCQ LTHQNIRLLI GIRYYSQTGR HLFTFPLYYQ VDQGNLLELD YLTLATLITK
ELALTGGSNS HQDELILRVI QSCNHVENFV RQRQQDVEKL YTFNSNFIAS EQALVFGHHL
HPTPKSRQGF ADHELSIYSP ELKGSFPLHY FRVHQSMVLE GSQLSQTATT LIKSELLADE
NVDYQFKNTY CDEDDYALLP IHPWQANYLL QQPQIQQLIK QEILQDLGLV GRAYQPTSSI
RTVYHPDAAF MLKLSLNIKI TNSVRTNLYK ELERSLEVHQ ILTSEIGQRL YQRFPDFQII
TDPAYITLKI DGVAVDGFST ILRENPFLNN PLTDATCVVA LCQDSILGNG SRLARIIEEL
AQQENRSTEA VSLDWCNRYL QIYLEPILWL YFTYGIGLEA HQQNSVVQLK DGYPERFFYR
DNQGYYYRRS CHQLLDHILP GISQKSETIC DDEVIDERLT YYLFFNNLFG LINAFGVAGL
IDEKLLLGEL RNILGKYSEH SLVNNLLSQS QLLCKANLLT RFHNLDELVG PVSTQSVYVA
VDNPLM
|
|---|
| |