Gene Ava_2809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2809 
Symbol 
ID3681645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3471998 
End bp3473698 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content37% 
IMG OID637718155 
ProductSerine/threonine protein kinase 
Protein accessionYP_323317 
Protein GI75909021 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0136026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.462239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGGAG CATCTCTGAT TGGGAAAACA CTTCGTAGTC GCTATTATAT TACAGACAAA 
ATAGGAGAGG GCGGTATTGG TGAGACTTAT TTAGCTATCG ATAAGGATCA GCCAGAGGAT
TATCAATGTG TTATTAAAAG ACTTAAACCT CAAAATACCA ACCAGTCTAC AATAATGTGG
TTACAACGAG CTTTTAATCG AGAAGCGGTA ACGCTACAAA GACTCGGAAG TCACGACCAA
ATCCCCAGAT TATTAGCTTT TTTTCGAGAG GATGAAGAGT TTTTTATAGC ACAAGAATTT
ATTCATGGTA TAAATCTGCG TACAGAATTT AGTAATTCTG GAAAATGGAG TGAGACTCAA
GTTATTTCCT TGTTGCAGAA TATTTTAGAA GTTCTAGATT TTGTTCATCA AAATCAAGTC
ATCCACCGTG ATTTAAAACC AGAAAACTTA ATCAAACGTA GCAGCGACAA TAAAATTGTT
TTAATTGACT TTGGTGCTGT TAAAGAAATA GGTACGCAAA TTATCAACAA CAAGGGTAAA
AAAGTCTCAA CTAGCTTTAT TATTGGTACA CCGGGATATA TGCCGATGGA ACAGCTAAGA
CAAAATCCGA TGCTTTGTAG TGATATTTAT GCAGTAGGAA TGATAGCCAT TGAGGCGCTA
ACAGGCTTAC ATTCTACAAA ACTTTTAGAT TCGTATACAG GGCAAATTGT TTGGCGCGAT
CGCCTAAAAA TTAGAGAGGA TTTAGCAGAG ATTTTAGATA GAATGATAGC CTACAATCCC
CATCATCGCT ATCAGTCGGC TGCGGAATGT TTACAGGAAA CTCTAAGTTT ATCACAAGGT
TTAAATCATC AAAGACAGAC ATCAATATCA TTGTCTTTAT CCCCGATATG CACTATCATT
AGATTCGGCA GTTTTGGCAG AATAACTACT AATGAATTTA TTGGCAAATT TTTAGCTATC
ACTCAAAATA GAAAACTTGT CAAAACTCCT GGAATATCTT TAATATTGGC ATCGATAGTA
GCAATCATTG TGGGTAAGGG AATTTGGTCA CAAATATTAA TTAATAATAT CGATGCGATG
GCGGATGAAA TTTCTCTTCC TGCTTCCAGA GCCACGAAAG GTCATACTCC TAATATAAAT
ATTAGTAAAT TTCTCTCTTA TTTTATTAAT TCCTCCGCAA ATTTAACTAA GAAAAATCCT
ACAGATTTAC CAATAATTAA ACCACTTGTT CACAATCAAA GCTCATCACC AGTCCTCAGT
CGTCTACAGA CTCTCAGACT AGAGAATATC CAGATTCATC AGGTGGCTAC ACCCCGGACA
TATAATATTT GTAACGCTCC TTTACAACTG CTTCAGCCAA ATCATAGCGA TCGCCTAAAC
TTAGATTGGC AATTAGACTG GACAACTAAG GGGAATGCTC ACGTAGGGCG ATTAAAAATG
CAAGGTTATT CAGGGAAAAT GAGAACTATC TCTCCCGACG GTAAAGGCGG CTTGAGAACT
GTAGAGCAAA CTATGCAACT ATATACTTCT GCCAAAGGAT ATGTTTTGCT GGGGTTTAAT
CCTATGGATG TGGAGAAACA GCAAGCACGA CGATATAAAG CGAACAATTT GATAATTAGA
GTAGAAATTG ATGGTTCAAC AACAATAATC AACTGTGATG ATAGTGGAAA TATTTCCTCA
GCGATCGCCC AAGAATTTTA A
 
Protein sequence
MSGASLIGKT LRSRYYITDK IGEGGIGETY LAIDKDQPED YQCVIKRLKP QNTNQSTIMW 
LQRAFNREAV TLQRLGSHDQ IPRLLAFFRE DEEFFIAQEF IHGINLRTEF SNSGKWSETQ
VISLLQNILE VLDFVHQNQV IHRDLKPENL IKRSSDNKIV LIDFGAVKEI GTQIINNKGK
KVSTSFIIGT PGYMPMEQLR QNPMLCSDIY AVGMIAIEAL TGLHSTKLLD SYTGQIVWRD
RLKIREDLAE ILDRMIAYNP HHRYQSAAEC LQETLSLSQG LNHQRQTSIS LSLSPICTII
RFGSFGRITT NEFIGKFLAI TQNRKLVKTP GISLILASIV AIIVGKGIWS QILINNIDAM
ADEISLPASR ATKGHTPNIN ISKFLSYFIN SSANLTKKNP TDLPIIKPLV HNQSSSPVLS
RLQTLRLENI QIHQVATPRT YNICNAPLQL LQPNHSDRLN LDWQLDWTTK GNAHVGRLKM
QGYSGKMRTI SPDGKGGLRT VEQTMQLYTS AKGYVLLGFN PMDVEKQQAR RYKANNLIIR
VEIDGSTTII NCDDSGNISS AIAQEF