| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2803 |
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| Symbol | |
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| ID | 3681639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 3457416 |
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| End bp | 3462833 |
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| Gene Length | 5418 bp |
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| Protein Length | 1805 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637718149 |
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| Product | Serine/threonine protein kinase and Signal transduction histidine kinase (STHK) with GAF sensor |
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| Protein accession | YP_323311 |
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| Protein GI | 75909015 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG3899] Predicted ATPase
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.70885 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAATA TTCCCGGTTA TACTATCAGC GAAGAACTTT ATGATGGTTC CAGAACCCTA
GTTTATCGAG CTATTCGACA GGCAGACACC TTACCAGTGG TAATTAAACT GCTGAAAAAT
CCTTATCCCA GCTTTTCTGA ACTGGTACAG TTCCGCAACC AATACACCAT CGCCAAAAAT
CTCAACTATC CCGGAATCAT CGCCACCCAT AGCCTAGAAC CCTTACATAA TGGCTATCAG
TTAGTAATGG AAGACTTTGG CGGAATTTCT GTGAAGGATT ATTTCGTCCA CAATCATTAT
GTCGCGTCTC TAGATAAATT TTTACAAATA GCGATCGCCC TATGCGACAT CTTAGACATA
CTATATCGTC AGCGCATTAT TCATAAAGAT ATTAAACCTG CCAATATTCT CATTAACCCA
GAAACGACAC AGGTTAAATT AATTGACTTT AGTATAGCCT CCTTGCTTCC ACGGGAAACT
CAAACTTTAA TCAATCCCAA CGTTTTGGAA GGAACATTAG GTTATATTTC TCCCGAACAA
ACTGGACGGA TGAATCGTGG GATTGACCAT CGCACTGATT TTTATTCTTT GGGGGCAACT
TTTTACGAAC TATTGACAGG AAAATTACCA TTCCCCTCAG AGGACGCAAT GGAGTTGGTA
CATTGTCATC TGGCAAAAGC CCCAACTTTA GTACATGAAA TTAATCTAAC AATTCCATCC
GTACTCTCAG ACATTGTTAA CAAACTCATG GCGAAAAATG CGGAAGACCG CTATCAAAGC
GCATTAGGTC TGAAGTATGA TTTAGAAAAG TGCTTAGTCC AACTGCAAGA AACGGGTAAA
ATTGAGAGTT TCCCAATTGC TCAGAGGGAT GTGTGCGATC GCTTCATTAT TCCTGATAAA
TTATATGGAC GAGAAGCCGA AGTAGAAACC CTACTCCAAG CATTTGAGCG CGTCAGTACC
GGTAACACCG AAATGATGCT GGTAGCTGGG TTTTCGGGTA TTGGGAAAAC AGCCGTAGTC
AACGAAGTTC ATAAACCCAT TGTTCGACAA CGGGGTTATT TTATTAAAGG CAAATATGAC
CAATTTCAGC GTAATATTCC CTTTAGTGCT TTTGTACAAG CATTCCGGGA TTTAATGGGG
CAGTTGTTGA CAGAAAGCGA CGCTCAAATT CAGCAATGGA AAAGTCAGAT ATTAGCAGCC
GTTGGTGAGA ATGGACAGGT AATTATTGAA GTCATCCCCG AATTAGCAGG AATTATTGGT
CAACAACCGC CAATCATAGA ACTATCAGGA ACTGCTGCCC AAAATCGGTT TAATTTATTA
TTTCAGAAAT TTGTCCAGGT ATTCAAAACT CAGGAACATC CCTTAGTGAT GTTTTTAGAT
GATTTGCAAT GGGCAGACTC CGCATCTCTC AACTTGATGC AGTTGTTGAT GAGTGAATCA
GGAGGGGGAT ATTTATTATT AATTGGGGCT TATCGAGATA ATGAAGTTTC CGATGCCCAT
CCATTGATGT TCAGTTTGGC AGAAATTAGA AAAGCCCAAG CCACCATCAA TACTATTACC
CTTGCGCCCC TGAGTCAATC TAGTTTAAAT CAACTAGTGG CAGATACCCT GAGTTGTTCA
TCGGCAATTG CCCAACCATT AACTCAATTG GTATATCAAA AAACCAAGGG AAACCCCTTT
TTCAGCACCC AGTTTATCAA GGCGATATAT GAAGATGGAC TCATTACATT TAATGGGGAT
GAGGGAAATT GGCAGTGCGA TATTGTGGGA GTTAAAGAGT CATCCCTTTC CGATGATGTT
GTTGAATTCA TGGCATTGCA GTTACAGAAA TTGCCACAGA CAACACAGAA TATTCTCAAA
TTTGCGGCGT GTATAGGGAA TAAATTTGAT TTAGGAATTT TGGCGATTAT TTGGGAAAAA
TCATTAACTG AAACCGCTAC AGCCTTATGG AAGGCATTAC AAGAAGGATT GATTTTACCC
CAGAGTGAAG TTTATAAATT TTATGTCGAT AGGGAAATAC AGGATGAAGT CAAAGGTTCA
CAAACTGTTA CCTACAAATT TCTCCACGAT CGCGTCCAGC AAGCAGCATA CTCATTGATT
CCCGCAGAGC AAAAGCAGTA TACCCATTTC CAGATCGGTC AATTGCTGTT GCAAGGGTTA
TCTCAGGGGG AACAAGAAGA ACGGATTTTT GACATTGTCA ATCAGCTGAA TATGGGGCTA
GATGTCATCA CTAGCAATGA ACAGAAACAA GAACTGGCGC ATCTAAACTT AAAAGCTGGA
CAAAAAGCCA AACTCTCAGC CGCCTATCAA GCTGCTTACG ACTATTGCAC CATTGGGATG
AGTGTATTAT CGCCAGATGC TTGGCAGCAA GACTATCCAC TCATGTACAG TTTGCACCGT
GATGCTTCAG AAGCCGCTTA TCTTTGTGGT AAATTTGACC AAGCCGAAGC CTTGTATGCA
GAAACACTCA CCTATGCTCA AGCCCCCCTT GACCAAGCCA TAGTTTATCG CATACAGATG
ACACAGTATC AGCTCCAGGG ACGAAATGCT GAGGCGATCG CTATTCAACG TCAAAGTTTA
CAGATGTTAG GATGGACAAT CCCCACACAA CCGGAGATGA TACAAGCTGG CCTAGATGCG
GAAATCGCCA CAGTTCAGCA ATTTCTAGAG CAGCATACCA TTGAATCCAT TCTTGCCGCC
CCCAAAATGG TAGATCCCAG CATTGCCGAA ATGCTGCGAA TTTTACAAAT TTTGTTCTAC
GCCGCCTGGC TCGATGGTCA AAGCACCTTA GCATTGCTAG CACTCGCCAA GATGACCACG
CTGTCATTAC AGTATGGTAA CAGCGATATG TCTCCCTTTG GTTATGCCGG CTATGGCTTG
ATTGCTAATG GTGTATTCAA AGACTGCGCC ACTGCTTATG AGTTTGGGGA AATGGCAGTA
CAGCTTTGTG AACAGTTTGA TAATGCTGAT GTGCGAGGGA TGACAAATTT CATCTTTGCA
GCTGATGTGC ATAGCTGGAG TCGTCCCATT CGAGAGGCAG ATACATACTA TAACAACGCC
TACCAATATG GGATGGAAGC GGGAAACTGG CTAACAGTAG GCTTCATGAT GATGCAGAGT
GGTTCCGATC GCCTAACTTA TGGTAAACAT TTAGATGATT TGTATGCGAT CGCTCAAAAT
CATGCAGCCT TTCTTCATCA AATCAAAAGC TTAGATAACC TAGATGCTTT AACAGCAGGA
GTTCTGCAAC CAATTCGCCA TCTCCTGGGG TTAACAAAAA CGCTCTTCAC CTTTGATGAT
GACGATTTTA GTGAAGCTGA ATATTTGCAA AAATATGCCA ATGCTCCCTA TCACTTATCT
TGGTTATATT CCGTTAAAAT TCGCCATGCT TATTTATTTG ACCAAAAATC CACCTACTCC
GATTTAATCC CCCAACTGAG CATGATTGAA ACCACTATTT CCAGTCATGC AAAAGTCCCT
TCCAGCGTTT TTTATGTGGC ATTAATGCAC CTGGCGCTAG CTGAAACCGC TACCGAAGCA
TCTGAGCGTC AACACCATTG GCAAGCACTC CTCCCCCTAG AAACAAGCTT AAAGCGTTGG
CTAAAAGCTT GTCCTGAAAA TATCCGGCAC AAGTTCCTCC TCATTCAAGC AGAAAAAGCC
CGAATTAAAA AACAAAAAAC CAAGGCTATA GAACTTTATG AACAAGCAAT TAGCCAAGCT
CAAGCAAATC AGTATGGCTA CGAAGAAGCT TTAGCTAACG AACTTGCAGC TAAATTCTAT
CTCGACTGGG GTAAAGTAAA AATTGCCCAA GTATATATGC AGGAAGCCTG CTACGGCTAC
GCCCGTTGGG GAGCCAAAGC CAAAGCTCAT CACCTAGAAA AAACCTATCC CCAACTACTC
AAACCTATTC TGCAACAGCA ACGAATCAAC TTCAACCCCT TGGAAACTAT TACCTTTCGT
GGGGCCACTT CATCTACTCA TACTACTACT ACTAGTAGCA CAAATATTTC AGAGATTCTG
GACTTTACTT CTGTTCTCAA AGGCGCTCAA GCTATATCTG GCTGTATTGA ATTAGACGAA
CTGATTGCCA ACCTCACCCG GATTATCCTC GAAAATTCCG GCGCGAAAAA ATCTGTACTC
ATTCTTCCCC TAGAAGAAAC TTGGCAAGTT AAAGCAATTA CCTCGGTTAA TCAAGAGTCA
AGTTCTCACA CTAATATACA AACTATCCTT TCCTCACAAT CAATAGAAGA TTGTCAAGAT
ATACCCCCAA AAATTATCAA TTACGTAAAA AATACCCAGA AACCCCTGAT TATAGACAAT
TGCCAAACAG ATATTCCTGG GGTAATTGGG GAATATATGC TAGAGCATCA GCCAAAAAGT
GTATTATGCA CACCAATTAT TCATCAAGGT CATTTAGTGG GAATTCTCTA CTTAGAAAAT
GAACTCACAA GTGAGGTATT TAATAGCGAA CATTTGCAAG TAGTCAATCT ACTTTCTTCC
CAAGCAGCAA TATCACTAGA AAATGCCAGA CTTTATCAAA AAGCCCAACA AGCATTACAA
GATTTACAAC AAGCCCAATT ACAAATTGTC CAAAGTGAAA AAATGTCGGC ACTGGGTAAT
TTAGTTGCTG GGGTAGCCCA TGAAATGAAT AATCCTTTGG GCTTTATTGC TGCCAGTCTT
ATGCAAGCTC AACCAATCAT AGCTGACATT ACCGAACACT TGAAGCTCTA TCAAGAAAAT
TTGCCCGACA AGATTGAGAA AATCGCAGAC CATGCCCAAG AAATTGACTT GGAATATATT
TTAGAAGATT TGCCGAAGAT GATTGAGTCG ATGACAATGG CTTGTGAAAG ACTCAAAAAT
ATTAGTACCA GTCTTCGCAC TTTCTCTCGT GCTGATAGAG ATTATAAAGT ACCATTCAAT
ATTCATGAAG GTATTGAGAG TACAATTCTC ATTTTAAAGC ATCGTCTAAA AGCTAACGAA
CAACGTCCAG CAATTGAAGT AGTAACAGAA TATGCTGATT CACCCATGAT TGAATGCTTT
CCAGGGCAAA TAAATCAGGT ATTTATGAAC ATTCTGGCAA ATGCCATTGA TGCTTTAGAT
GAGGCAAATA TGGGACGTAG TTTTGCGGAA ATTCAAGCAA ATCACAACAA AATAATGATT
AGAACCTTAC TAGAAAATCA GCAAGTGAAG ATTACTATTG CTGATAATGG GAAGGGAATG
AGCGAAGAAG TTAAAGCCAA GATATTTGAC CACTTATTTA CTACCAAAAT GGTAGGAAAA
GGAACGGGAT TAGGATTGGC TATAGCTCAG TCTATTGTGG TAGAAAAACA TGGCGGAACG
CTGACAGTAA ATTCTACCCT TGGTGAGGGA ACTGAATTTG TCATCTCCTT ACCGATTTTG
GATGAGTCCC AAAATTAG
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| Protein sequence | MLNIPGYTIS EELYDGSRTL VYRAIRQADT LPVVIKLLKN PYPSFSELVQ FRNQYTIAKN
LNYPGIIATH SLEPLHNGYQ LVMEDFGGIS VKDYFVHNHY VASLDKFLQI AIALCDILDI
LYRQRIIHKD IKPANILINP ETTQVKLIDF SIASLLPRET QTLINPNVLE GTLGYISPEQ
TGRMNRGIDH RTDFYSLGAT FYELLTGKLP FPSEDAMELV HCHLAKAPTL VHEINLTIPS
VLSDIVNKLM AKNAEDRYQS ALGLKYDLEK CLVQLQETGK IESFPIAQRD VCDRFIIPDK
LYGREAEVET LLQAFERVST GNTEMMLVAG FSGIGKTAVV NEVHKPIVRQ RGYFIKGKYD
QFQRNIPFSA FVQAFRDLMG QLLTESDAQI QQWKSQILAA VGENGQVIIE VIPELAGIIG
QQPPIIELSG TAAQNRFNLL FQKFVQVFKT QEHPLVMFLD DLQWADSASL NLMQLLMSES
GGGYLLLIGA YRDNEVSDAH PLMFSLAEIR KAQATINTIT LAPLSQSSLN QLVADTLSCS
SAIAQPLTQL VYQKTKGNPF FSTQFIKAIY EDGLITFNGD EGNWQCDIVG VKESSLSDDV
VEFMALQLQK LPQTTQNILK FAACIGNKFD LGILAIIWEK SLTETATALW KALQEGLILP
QSEVYKFYVD REIQDEVKGS QTVTYKFLHD RVQQAAYSLI PAEQKQYTHF QIGQLLLQGL
SQGEQEERIF DIVNQLNMGL DVITSNEQKQ ELAHLNLKAG QKAKLSAAYQ AAYDYCTIGM
SVLSPDAWQQ DYPLMYSLHR DASEAAYLCG KFDQAEALYA ETLTYAQAPL DQAIVYRIQM
TQYQLQGRNA EAIAIQRQSL QMLGWTIPTQ PEMIQAGLDA EIATVQQFLE QHTIESILAA
PKMVDPSIAE MLRILQILFY AAWLDGQSTL ALLALAKMTT LSLQYGNSDM SPFGYAGYGL
IANGVFKDCA TAYEFGEMAV QLCEQFDNAD VRGMTNFIFA ADVHSWSRPI READTYYNNA
YQYGMEAGNW LTVGFMMMQS GSDRLTYGKH LDDLYAIAQN HAAFLHQIKS LDNLDALTAG
VLQPIRHLLG LTKTLFTFDD DDFSEAEYLQ KYANAPYHLS WLYSVKIRHA YLFDQKSTYS
DLIPQLSMIE TTISSHAKVP SSVFYVALMH LALAETATEA SERQHHWQAL LPLETSLKRW
LKACPENIRH KFLLIQAEKA RIKKQKTKAI ELYEQAISQA QANQYGYEEA LANELAAKFY
LDWGKVKIAQ VYMQEACYGY ARWGAKAKAH HLEKTYPQLL KPILQQQRIN FNPLETITFR
GATSSTHTTT TSSTNISEIL DFTSVLKGAQ AISGCIELDE LIANLTRIIL ENSGAKKSVL
ILPLEETWQV KAITSVNQES SSHTNIQTIL SSQSIEDCQD IPPKIINYVK NTQKPLIIDN
CQTDIPGVIG EYMLEHQPKS VLCTPIIHQG HLVGILYLEN ELTSEVFNSE HLQVVNLLSS
QAAISLENAR LYQKAQQALQ DLQQAQLQIV QSEKMSALGN LVAGVAHEMN NPLGFIAASL
MQAQPIIADI TEHLKLYQEN LPDKIEKIAD HAQEIDLEYI LEDLPKMIES MTMACERLKN
ISTSLRTFSR ADRDYKVPFN IHEGIESTIL ILKHRLKANE QRPAIEVVTE YADSPMIECF
PGQINQVFMN ILANAIDALD EANMGRSFAE IQANHNKIMI RTLLENQQVK ITIADNGKGM
SEEVKAKIFD HLFTTKMVGK GTGLGLAIAQ SIVVEKHGGT LTVNSTLGEG TEFVISLPIL
DESQN
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