Gene Ava_2802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2802 
Symbol 
ID3681638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3456036 
End bp3456953 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content42% 
IMG OID637718148 
ProductLysR family transcriptional regulator 
Protein accessionYP_323310 
Protein GI75909014 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAA TAGATTTATC CTCTATTGAC CTCAACCTAC TAGTTACGTT TGAGGTGCTT 
TTTGAAGAGC GAAGTGTCAC AGTAGCCGCC CAGCGCTTGT ATTTAGGACA ACCAGCCATG
AGTGCGGCTC TTGCAAGGCT ACGCATACTA TTTCAGGATG AATTATTTAT CCGTATTGGT
CGGGAAATGC AACCGACAGC AAAAGCTCTA GAAATTGCTC CAGGTATATC AGTTGCGCTT
CAGCAGATTC GACAGACATT AGAATCTAGC CAAACCTTTG ACCCAAAAAC TTCTAAACAT
ACCTTTGCCA TTGGTAGTTC GGACTACACC AGCTATGTTG TTCTGCCCAA GTTGTTGGAA
GTTTGTCGCC AGGTTGCACC AAGCATTGAT TTTCGACTAA TTGGTTTTGA GAAAGATAGT
GTAGGAGACC TGTTAGAACA ACGAGAAATT CATGTTGCGT TGGGTTTGTT TCAAAATCCA
CCCCGACAAA CGAGACAAAT GCCATTATTT GAAGAACACT TTGTTGGTCT TTGTCGCCGT
GGACATCCTG TTGTCACTCA GGAGAATATG ACACCGGAGA CCTTTGCTTG TCTCCCTCAA
GCTCTTTTTA CTCTCCGAAG AGATGATATT GGTGAAATTG ACAAGGTGCT TGCTCAATAC
AATCTTCAGC GTCGAGTAGT ATTGACTACC CCCCACTTGC TCATCTTGCC AACTGTCATT
TCATCTAGTG ACTTAGTGAC TGTCATTCCT TCACGACTGG TAACACCATT TGCTTACAAA
GATACACTAG AAATTTTTGA ACTTCCTGTA AAAACTGAAC CTTGGATGAT TTCTATGTTG
TGGAGTAAAC TTACAGATCA AGATCAAGCG AGTATTTGGT TACGGCAGAT GCTCAAAAGT
GTTTGTGAAG GAATTTAA
 
Protein sequence
MKLIDLSSID LNLLVTFEVL FEERSVTVAA QRLYLGQPAM SAALARLRIL FQDELFIRIG 
REMQPTAKAL EIAPGISVAL QQIRQTLESS QTFDPKTSKH TFAIGSSDYT SYVVLPKLLE
VCRQVAPSID FRLIGFEKDS VGDLLEQREI HVALGLFQNP PRQTRQMPLF EEHFVGLCRR
GHPVVTQENM TPETFACLPQ ALFTLRRDDI GEIDKVLAQY NLQRRVVLTT PHLLILPTVI
SSSDLVTVIP SRLVTPFAYK DTLEIFELPV KTEPWMISML WSKLTDQDQA SIWLRQMLKS
VCEGI