Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2802 |
Symbol | |
ID | 3681638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3456036 |
End bp | 3456953 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637718148 |
Product | LysR family transcriptional regulator |
Protein accession | YP_323310 |
Protein GI | 75909014 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTAA TAGATTTATC CTCTATTGAC CTCAACCTAC TAGTTACGTT TGAGGTGCTT TTTGAAGAGC GAAGTGTCAC AGTAGCCGCC CAGCGCTTGT ATTTAGGACA ACCAGCCATG AGTGCGGCTC TTGCAAGGCT ACGCATACTA TTTCAGGATG AATTATTTAT CCGTATTGGT CGGGAAATGC AACCGACAGC AAAAGCTCTA GAAATTGCTC CAGGTATATC AGTTGCGCTT CAGCAGATTC GACAGACATT AGAATCTAGC CAAACCTTTG ACCCAAAAAC TTCTAAACAT ACCTTTGCCA TTGGTAGTTC GGACTACACC AGCTATGTTG TTCTGCCCAA GTTGTTGGAA GTTTGTCGCC AGGTTGCACC AAGCATTGAT TTTCGACTAA TTGGTTTTGA GAAAGATAGT GTAGGAGACC TGTTAGAACA ACGAGAAATT CATGTTGCGT TGGGTTTGTT TCAAAATCCA CCCCGACAAA CGAGACAAAT GCCATTATTT GAAGAACACT TTGTTGGTCT TTGTCGCCGT GGACATCCTG TTGTCACTCA GGAGAATATG ACACCGGAGA CCTTTGCTTG TCTCCCTCAA GCTCTTTTTA CTCTCCGAAG AGATGATATT GGTGAAATTG ACAAGGTGCT TGCTCAATAC AATCTTCAGC GTCGAGTAGT ATTGACTACC CCCCACTTGC TCATCTTGCC AACTGTCATT TCATCTAGTG ACTTAGTGAC TGTCATTCCT TCACGACTGG TAACACCATT TGCTTACAAA GATACACTAG AAATTTTTGA ACTTCCTGTA AAAACTGAAC CTTGGATGAT TTCTATGTTG TGGAGTAAAC TTACAGATCA AGATCAAGCG AGTATTTGGT TACGGCAGAT GCTCAAAAGT GTTTGTGAAG GAATTTAA
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Protein sequence | MKLIDLSSID LNLLVTFEVL FEERSVTVAA QRLYLGQPAM SAALARLRIL FQDELFIRIG REMQPTAKAL EIAPGISVAL QQIRQTLESS QTFDPKTSKH TFAIGSSDYT SYVVLPKLLE VCRQVAPSID FRLIGFEKDS VGDLLEQREI HVALGLFQNP PRQTRQMPLF EEHFVGLCRR GHPVVTQENM TPETFACLPQ ALFTLRRDDI GEIDKVLAQY NLQRRVVLTT PHLLILPTVI SSSDLVTVIP SRLVTPFAYK DTLEIFELPV KTEPWMISML WSKLTDQDQA SIWLRQMLKS VCEGI
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