Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2789 |
Symbol | |
ID | 3681722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 3442322 |
End bp | 3443215 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637718135 |
Product | hypothetical protein |
Protein accession | YP_323297 |
Protein GI | 75909001 |
COG category | [R] General function prediction only |
COG ID | [COG1512] Beta-propeller domains of methanol dehydrogenase type |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00516287 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCAAA CTATGTGGAC TAAAAGCATC CAAAGATTGT GTCTATTTTG CGTCGCTCTT TTTTGTAGTC TTGGGCTTTC TCTCAATCAT GTCCAAGCTC AATCAGTGCC TTTCTATTGG GAATTTATGA ATGTTGATAT CGCCGTACAA ACTAATGGTG ATATGTACGT TACCGAAACT CAGAAATATA CATTTACCGG AGACTATAAA AACCAGCGCT ATCGTTACAT TCCCCTAGAT AAAGTAGACC AAATTACCGA AGTATCAGTA TCAGAGAATG GTCAATTATT ACCCAGCGAA ACAGGTACAG AAAATAACCA ACTTTGGATT CGTTGGAAAC ATCAACTTAA AGCGCCTGAA AGCCATACTT TTGTCTTAAA ATATCGCGTT GTAGGTGGAT TACACGTAAG TGATAATGAT GCTCAAGTCT ATTGGAAAGC CATTTTTGCT GACCGTCAAG CCCCTATTAA ACAGGCACGA GTCAGAGTAA AATTTCCTGA ACAATTGGCT AATAATATCA AAGATTTCCA AAGCTTTGGT GTAGCTGCCA ACGTCCGTAA AGTAGATGCA AATACAGTTG AGGCTGTTGC TCAAACATCT CTGGAACCAG GGGAAGAATT AGAAATTCAG GTGAAATTTG ATCCCACGGG GACTGAGATA AAAACTCCTA TCTGGCAAAG TTCACAATCT TTTATTGATG GGAGTCAGTT GATATTGTGG GGATTTTTAC TGTTCTTATT CTTTATTTTC TTTTTCCGTG GAAGTGGTGG TGTTAGTGTT AGTTACGGAA GTGATGGAAG CAGTGATGGA GGAGGAGGAG GAGGAGGAGG TGGTGGTGGT GGTGGTGGCG GTGGTGGCGG TGGTGGCGGC GGTGGCGGCG GTGGTGGTGG TTAA
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Protein sequence | MIQTMWTKSI QRLCLFCVAL FCSLGLSLNH VQAQSVPFYW EFMNVDIAVQ TNGDMYVTET QKYTFTGDYK NQRYRYIPLD KVDQITEVSV SENGQLLPSE TGTENNQLWI RWKHQLKAPE SHTFVLKYRV VGGLHVSDND AQVYWKAIFA DRQAPIKQAR VRVKFPEQLA NNIKDFQSFG VAANVRKVDA NTVEAVAQTS LEPGEELEIQ VKFDPTGTEI KTPIWQSSQS FIDGSQLILW GFLLFLFFIF FFRGSGGVSV SYGSDGSSDG GGGGGGGGGG GGGGGGGGGG GGGGGGG
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