Gene Ava_2789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2789 
Symbol 
ID3681722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3442322 
End bp3443215 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content42% 
IMG OID637718135 
Producthypothetical protein 
Protein accessionYP_323297 
Protein GI75909001 
COG category[R] General function prediction only 
COG ID[COG1512] Beta-propeller domains of methanol dehydrogenase type 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00516287 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCAAA CTATGTGGAC TAAAAGCATC CAAAGATTGT GTCTATTTTG CGTCGCTCTT 
TTTTGTAGTC TTGGGCTTTC TCTCAATCAT GTCCAAGCTC AATCAGTGCC TTTCTATTGG
GAATTTATGA ATGTTGATAT CGCCGTACAA ACTAATGGTG ATATGTACGT TACCGAAACT
CAGAAATATA CATTTACCGG AGACTATAAA AACCAGCGCT ATCGTTACAT TCCCCTAGAT
AAAGTAGACC AAATTACCGA AGTATCAGTA TCAGAGAATG GTCAATTATT ACCCAGCGAA
ACAGGTACAG AAAATAACCA ACTTTGGATT CGTTGGAAAC ATCAACTTAA AGCGCCTGAA
AGCCATACTT TTGTCTTAAA ATATCGCGTT GTAGGTGGAT TACACGTAAG TGATAATGAT
GCTCAAGTCT ATTGGAAAGC CATTTTTGCT GACCGTCAAG CCCCTATTAA ACAGGCACGA
GTCAGAGTAA AATTTCCTGA ACAATTGGCT AATAATATCA AAGATTTCCA AAGCTTTGGT
GTAGCTGCCA ACGTCCGTAA AGTAGATGCA AATACAGTTG AGGCTGTTGC TCAAACATCT
CTGGAACCAG GGGAAGAATT AGAAATTCAG GTGAAATTTG ATCCCACGGG GACTGAGATA
AAAACTCCTA TCTGGCAAAG TTCACAATCT TTTATTGATG GGAGTCAGTT GATATTGTGG
GGATTTTTAC TGTTCTTATT CTTTATTTTC TTTTTCCGTG GAAGTGGTGG TGTTAGTGTT
AGTTACGGAA GTGATGGAAG CAGTGATGGA GGAGGAGGAG GAGGAGGAGG TGGTGGTGGT
GGTGGTGGCG GTGGTGGCGG TGGTGGCGGC GGTGGCGGCG GTGGTGGTGG TTAA
 
Protein sequence
MIQTMWTKSI QRLCLFCVAL FCSLGLSLNH VQAQSVPFYW EFMNVDIAVQ TNGDMYVTET 
QKYTFTGDYK NQRYRYIPLD KVDQITEVSV SENGQLLPSE TGTENNQLWI RWKHQLKAPE
SHTFVLKYRV VGGLHVSDND AQVYWKAIFA DRQAPIKQAR VRVKFPEQLA NNIKDFQSFG
VAANVRKVDA NTVEAVAQTS LEPGEELEIQ VKFDPTGTEI KTPIWQSSQS FIDGSQLILW
GFLLFLFFIF FFRGSGGVSV SYGSDGSSDG GGGGGGGGGG GGGGGGGGGG GGGGGGG