Gene Ava_2771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2771 
Symbol 
ID3681899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3421785 
End bp3426458 
Gene Length4674 bp 
Protein Length1557 aa 
Translation table11 
GC content44% 
IMG OID637718117 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_323279 
Protein GI75908983 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAATA TTCCTATTTC TGCATTACTA CGTTTTGGAA TTGTCATATT TTCTGTCGCA 
CTGGCTTGTG CGCTAATGCT ATTGTTAGAC CCTTGGCTAG GGATGACCAG TACTCCTTTT
TTATTATTCT TTAGCGCTGT CATGTTCAGT GCTTGGTATG GAGGTTTTTG GTCAGGAGTG
TTAGGAACTT TCTTATCTGT AATACTTAGT AATTACTTCT TTTTTCACCC AAGATATACT
CTCTCTATTG ATACTGATAA TGTAGTTATC ATAGGGTTAT TTGCTGTACA AGGATGGTTT
TTCAGTTTTA TCTGTGAAAT CTTGAGAAAT ACCAAAAAGC AAGATGCAGT TAATTTACAG
AAACTTAGGC AAAGCGAGGA GCGATTTCGA TTAGCTTTGA GCAATTCTGA TATCGTGGTT
TTTCAACAGG ATCGAGATTT GCGGTATCGA TGGATTCATA ATTATCAAGG TGTAGCCTCT
GCTGAAGAAA TCATTGGTAA GTCAGACAAT GAATTGTTCC CCGCTTCAGT GGCAGAAAAA
CTAACAGCCA TTAAGCAAAA AGTATTAGAG AAAGATGTTT CTGTCCATGA GGAAGTGTCC
GTAATTTTTC ACGGAAAAGT CGTTTACTAT GATTTGTTAG CCGAACCCCT GACAATTGAC
GGTCAAATCC AGGGTATTAC CTGTGCAGCA GTAGACATTA CTGAACGCAA GCGCTCAGAA
CTAGAGAAAG CTAAATTACA GAGTAAACTC CAAAAAGCTA TTGAGCAGCA AGACGAATAT
CTAGCATTAT TGAATGCTTG GCTGGCTAGC TCCCCTGTAG CCCTAGCTTT TTTAGATACA
AAACTACGTT ACGTTTATAC TAATGAAGCT CTGGCAGCAA TTAACGGTGT ACCCCAAAGT
CAACACATTG GGCGCACTTT GAGGGAAGTA TTGCCAGAAT GGGCAACACA ACTGGAGCCT
ATTCTCCAAC AAGTAATGGC AACCAAGCAG CCACTCGTAA ATCAAGAAGT ATGTGGGGTA
ACCTATCCAT CAGGAGTACA TCGTTGTAGC TTAGTGAACT ACTATCCAGT ATGTTTACCA
GATGGAAAAC TGCTGGGGGT GGGAGTGACG GCTCTCGATA TTACAGAACG AAAGCAGGCT
GAGGACGCGC TACGGTACAT TGCCCAAACC AGTAACACAC TCTCCAGTTC TTTGGATTAC
GAGCAAACTT TGGCACAGAT TGCGAAAATA TCCGTCCCGC AACTAGCAGA CTGGTGCAGT
ATTGATATTA TCAACCAAGA TGGCTCGATT CGCCGCTTAC CTATTGCTCA TGTAGACCCA
ACAAAAGCAG AATTGGCAAG ATTATTTCAG GAATATGCAC CACAATTAGG GAGTGGGAGT
TTAGTTGCTA ACGTATTACA AACTGGGGAA CAGTTATTAG TTGCAGACTT ACCTGATTCT
CCTTTACCAG CAGATCAAAA TGAGGAAAAT CTGGAGTTGC TGCGGCAGAT AGGAATTAAA
TCACTCATGC TTTTACCCTT AATAGCACAT GAGCAAGTGC TAGGATGTAT AACCTTTGTT
AGTGCTGAAT CAGGTCGTAG CTACAATCAA TCTGACTTAA GCTTAGCCAA AGACATTGCC
TATCGTGCTG CCCTAGCGAT GGAGAATGCT CAACTGTATC GAGATGTTCA ACAAGCTTTA
AAACATTATG CTGAATCATT GGCGCTTTTA GATGCCTTGT TGGCAGGCGC ACCTGTAGCA
GTCTGTTTTT TGGATAAGGA ATTACGATAT CTCCGCATTA ATCAAGTATT AGCTGATCTC
AATGGCTTGA GTATAGAAGA GCATCTGGGA CGAAAATTTC AGGATGTTTT ACCCAAGATG
GCAGAGCAAT TTGAAGAGCA ATTGCAACAA GTATTGGAGA CGGGACAACC TCTGCTGAAT
TTGGAGGTTA GTGGTGAGGC GCTAGGAAGA CCAGAAATTA ATAGCTATTG GTTAGGTAAT
TATTACCCAG TCTACGACGG CATGGGCAAA ACAGTAGGCA TCGGGATTAT CCTGGCAGAT
GTGACAGCTA CTAAGCAAGT AGAAATTGCT CTGCGAGAAA GTGAAGAACG CTTCCGAGCC
ATGTTTGACC AAGCGGCTGT GGGCATTACC TTAGTTACCT TAGATGGTCA ATTTCTGCAA
AATAATCCGG CTTTGTGCGA CATTACCGGT TACAGCTCTG AAGAATTAAG TCAGATGAAG
TTTCCCGAAA TTACTCACCC TGATGATGTG GAAGCTGATT GGGCATACGC CAAGCAAGTA
TTAGCCAAGG AAATTAATGG TTACTCTCTA GAAAAGCGTT ATCTTCGCAA AGATGGCACG
ACTGTTTGGG TGAATCTGAC TGCATCAGCC GTATGGAATG AGCAGGGAGA ACCTAAATAT
GCGTTGGGTA TTATTGAAGA TATTAATGAG CGCAAGCAAG CAGAAGCCGC ACAAAACTTT
TTAGTTGAAG CCAGCACTAT TTTAGCAGCT TCTTTAGATT ATGAGGTTGC CCTGAATAAT
GTGGCTCATT TGGCAGTACC TACCATTGCT GATTGGTGTG CTGTAGATAT TCTCCAAGCT
GACTGGTCGA TTAAACGTGT AGCGATCGCC TGTGTTAATC CTGCAAAACT GGAGATTATA
GAAGAAATTC GCCGTTCATA TCCAACCAGA ACCGAGGGCA AACACCCGTT TCGAGATAAA
CTCCTCAAAG GAGCATCGGC TTTCTATCCT GAACTACCAA ACTCAATTTT GGTAGAGATA
GCACAGGATG AACAACATTT ACAATTATTA CAAAGCTTGG AAATGCGATC GCTGATGGTG
GTTCCCCTTT ACTCACGGGA GCAAATATTT GGGGTCATTT CCTTTGTTAC TGGTAGTTCA
GGCAGGCAAC TCAAACAAAC AGATTTGGCA TTGGCAGAAG ATATCGCCCG ACGAGCAGCT
ACAGCCATTG ATAATGCCAG ACTGTATCAG GAAACTCAGC AGGCGAAACA AGCCGCCGAG
TTAGCAATGA GTCGAATGTT ACGTTTACAA AGCATCACAG CAGCGCTCTC CGAAGCCCTC
ACGCCCCAAC AAGTTGCTGA TGTGGTAGTA AATCAAGGAT TAGCAGCTTT GGGAGCATCT
GCTGGATCTG TGGTTCTGTT GACTGAAGGC GGTACTACCC TGAAAATCAT TCAAGCCATC
GGCTACCCAG AATCGGTGCA AGATGCTTGG GAAACTTTCC CCCTAACTGC AACTGTACCA
ATTGCGGAAA CCGCCAGGAC AGGGGAAGCG ATTTTTTTAG CTAACGTCAC AGAATTTGCC
GCCAAATATC CACAAATTGC TAACGTCCCC TCCCTCACGG GTAATTGCGC TTTTGCTTGT
ATTCCTCTCA TCGTCGAACA GCAGACAATT GGAGTGATGG CATTAAGCTT TGCCACAGCC
CAAAAATTTA ACGAAGAACA GCAAAAATTT ATGTTGACAT TGGGTCAACA ATGCGCTCAG
GCGATCGCTC GCTCTCAACT TTATGAAGCA GAAAAAAATG CCAGAGCTGT AGCCGAATCC
ACTAACCGGA TTAAAGATGA ATTTTTGGCG GTTCTGTCCC ACGAATTGCG TACCCCCCTC
AATCCCATCA TGGGTTGGGC TAAGTTACTC CGCACGCGCA CATATAAGGA AGAGACCATC
AAGCAAGGTT TGGAAACAAT CGAGCGCAAC GCCAAGTTAC AAACTCAACT CATTGACGAC
TTGCTGGATG TTTCCCGCAT CTTACGCGGT AAGCTGAATT TGAATGTCTG CCTAGTAGAT
TTGAGAAACA CAGTTCAAGC TGGGTTAGAA ACAGTCCGTT TAGCCGCCGA AGCAAAATCA
ATAGCAATTC ACACAATCTT GAGTGATGAA CCTGTACAGG TGATGGGTGA TGGCGATCGC
TTGCAACAGG TCATCTGGAA TTTAGTCTCG AATGCCGTCA AGTTTACACC GTCGGAAGGA
CGGGTAGAAG TGCGTTTAGA ACAGGTGGGA CGAGATGCCC AAATCCAAGT GATTGACACA
GGTAAAGGCA TTACACCAGA ATTTTTACCT TATGTCTTTG AATACTTCCG TCAAGCAGAT
GCCAAGACAA CCAGGGTATT CGGTGGCTTG GGTTTGGGAT TGGCAATTGT CCACCATCTT
GTAGAATTAC ACGGTGGTAC AGTAGTAGCA CAGAGTGCCG GAGAAGACCA AGGAGCAACT
TTTACTGTCA AGCTACCCTT GCATAAAAGT GCTGATTACC AAGTGCAGAG TGCTAAGTCT
GCGGTTACAG AACTAGAGAA TCAAGACTCA CTATTGGCTG GTGTGCAGAT TCTTTTAGTT
GATGATCAAG AAGATGTACG GGAATTTTTT AGCTTTGCTC TAGAACAGTG TGGGGCAACA
GTAACTGCGG TAGCATCAGC CATAGAGGCA TTGGAAGCCC TAGCACGCTC AAAGGCAGAT
GTACTGTTAA GTGATATTGG GATGCCACAA ATTGATGGTT ATATGTTGTT GCGGCAAATC
AGAAAATGGT CGCCAGAACA AGGTGGACAA ATTCCAGCGA TCGCTCTGAC TGCCTATGCT
GGAGAAATTG ATCAAAAACA AGCCATCGCC GCAGGCTTTC AAAAGCATAT AGCTAAACCC
GCCGACCCAG TAGAGTTAGC TGAGGCGATC ACCCAACTCA TCGGGCGCAA ATAA
 
Protein sequence
MPNIPISALL RFGIVIFSVA LACALMLLLD PWLGMTSTPF LLFFSAVMFS AWYGGFWSGV 
LGTFLSVILS NYFFFHPRYT LSIDTDNVVI IGLFAVQGWF FSFICEILRN TKKQDAVNLQ
KLRQSEERFR LALSNSDIVV FQQDRDLRYR WIHNYQGVAS AEEIIGKSDN ELFPASVAEK
LTAIKQKVLE KDVSVHEEVS VIFHGKVVYY DLLAEPLTID GQIQGITCAA VDITERKRSE
LEKAKLQSKL QKAIEQQDEY LALLNAWLAS SPVALAFLDT KLRYVYTNEA LAAINGVPQS
QHIGRTLREV LPEWATQLEP ILQQVMATKQ PLVNQEVCGV TYPSGVHRCS LVNYYPVCLP
DGKLLGVGVT ALDITERKQA EDALRYIAQT SNTLSSSLDY EQTLAQIAKI SVPQLADWCS
IDIINQDGSI RRLPIAHVDP TKAELARLFQ EYAPQLGSGS LVANVLQTGE QLLVADLPDS
PLPADQNEEN LELLRQIGIK SLMLLPLIAH EQVLGCITFV SAESGRSYNQ SDLSLAKDIA
YRAALAMENA QLYRDVQQAL KHYAESLALL DALLAGAPVA VCFLDKELRY LRINQVLADL
NGLSIEEHLG RKFQDVLPKM AEQFEEQLQQ VLETGQPLLN LEVSGEALGR PEINSYWLGN
YYPVYDGMGK TVGIGIILAD VTATKQVEIA LRESEERFRA MFDQAAVGIT LVTLDGQFLQ
NNPALCDITG YSSEELSQMK FPEITHPDDV EADWAYAKQV LAKEINGYSL EKRYLRKDGT
TVWVNLTASA VWNEQGEPKY ALGIIEDINE RKQAEAAQNF LVEASTILAA SLDYEVALNN
VAHLAVPTIA DWCAVDILQA DWSIKRVAIA CVNPAKLEII EEIRRSYPTR TEGKHPFRDK
LLKGASAFYP ELPNSILVEI AQDEQHLQLL QSLEMRSLMV VPLYSREQIF GVISFVTGSS
GRQLKQTDLA LAEDIARRAA TAIDNARLYQ ETQQAKQAAE LAMSRMLRLQ SITAALSEAL
TPQQVADVVV NQGLAALGAS AGSVVLLTEG GTTLKIIQAI GYPESVQDAW ETFPLTATVP
IAETARTGEA IFLANVTEFA AKYPQIANVP SLTGNCAFAC IPLIVEQQTI GVMALSFATA
QKFNEEQQKF MLTLGQQCAQ AIARSQLYEA EKNARAVAES TNRIKDEFLA VLSHELRTPL
NPIMGWAKLL RTRTYKEETI KQGLETIERN AKLQTQLIDD LLDVSRILRG KLNLNVCLVD
LRNTVQAGLE TVRLAAEAKS IAIHTILSDE PVQVMGDGDR LQQVIWNLVS NAVKFTPSEG
RVEVRLEQVG RDAQIQVIDT GKGITPEFLP YVFEYFRQAD AKTTRVFGGL GLGLAIVHHL
VELHGGTVVA QSAGEDQGAT FTVKLPLHKS ADYQVQSAKS AVTELENQDS LLAGVQILLV
DDQEDVREFF SFALEQCGAT VTAVASAIEA LEALARSKAD VLLSDIGMPQ IDGYMLLRQI
RKWSPEQGGQ IPAIALTAYA GEIDQKQAIA AGFQKHIAKP ADPVELAEAI TQLIGRK