Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2771 |
Symbol | |
ID | 3681899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3421785 |
End bp | 3426458 |
Gene Length | 4674 bp |
Protein Length | 1557 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637718117 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_323279 |
Protein GI | 75908983 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAATA TTCCTATTTC TGCATTACTA CGTTTTGGAA TTGTCATATT TTCTGTCGCA CTGGCTTGTG CGCTAATGCT ATTGTTAGAC CCTTGGCTAG GGATGACCAG TACTCCTTTT TTATTATTCT TTAGCGCTGT CATGTTCAGT GCTTGGTATG GAGGTTTTTG GTCAGGAGTG TTAGGAACTT TCTTATCTGT AATACTTAGT AATTACTTCT TTTTTCACCC AAGATATACT CTCTCTATTG ATACTGATAA TGTAGTTATC ATAGGGTTAT TTGCTGTACA AGGATGGTTT TTCAGTTTTA TCTGTGAAAT CTTGAGAAAT ACCAAAAAGC AAGATGCAGT TAATTTACAG AAACTTAGGC AAAGCGAGGA GCGATTTCGA TTAGCTTTGA GCAATTCTGA TATCGTGGTT TTTCAACAGG ATCGAGATTT GCGGTATCGA TGGATTCATA ATTATCAAGG TGTAGCCTCT GCTGAAGAAA TCATTGGTAA GTCAGACAAT GAATTGTTCC CCGCTTCAGT GGCAGAAAAA CTAACAGCCA TTAAGCAAAA AGTATTAGAG AAAGATGTTT CTGTCCATGA GGAAGTGTCC GTAATTTTTC ACGGAAAAGT CGTTTACTAT GATTTGTTAG CCGAACCCCT GACAATTGAC GGTCAAATCC AGGGTATTAC CTGTGCAGCA GTAGACATTA CTGAACGCAA GCGCTCAGAA CTAGAGAAAG CTAAATTACA GAGTAAACTC CAAAAAGCTA TTGAGCAGCA AGACGAATAT CTAGCATTAT TGAATGCTTG GCTGGCTAGC TCCCCTGTAG CCCTAGCTTT TTTAGATACA AAACTACGTT ACGTTTATAC TAATGAAGCT CTGGCAGCAA TTAACGGTGT ACCCCAAAGT CAACACATTG GGCGCACTTT GAGGGAAGTA TTGCCAGAAT GGGCAACACA ACTGGAGCCT ATTCTCCAAC AAGTAATGGC AACCAAGCAG CCACTCGTAA ATCAAGAAGT ATGTGGGGTA ACCTATCCAT CAGGAGTACA TCGTTGTAGC TTAGTGAACT ACTATCCAGT ATGTTTACCA GATGGAAAAC TGCTGGGGGT GGGAGTGACG GCTCTCGATA TTACAGAACG AAAGCAGGCT GAGGACGCGC TACGGTACAT TGCCCAAACC AGTAACACAC TCTCCAGTTC TTTGGATTAC GAGCAAACTT TGGCACAGAT TGCGAAAATA TCCGTCCCGC AACTAGCAGA CTGGTGCAGT ATTGATATTA TCAACCAAGA TGGCTCGATT CGCCGCTTAC CTATTGCTCA TGTAGACCCA ACAAAAGCAG AATTGGCAAG ATTATTTCAG GAATATGCAC CACAATTAGG GAGTGGGAGT TTAGTTGCTA ACGTATTACA AACTGGGGAA CAGTTATTAG TTGCAGACTT ACCTGATTCT CCTTTACCAG CAGATCAAAA TGAGGAAAAT CTGGAGTTGC TGCGGCAGAT AGGAATTAAA TCACTCATGC TTTTACCCTT AATAGCACAT GAGCAAGTGC TAGGATGTAT AACCTTTGTT AGTGCTGAAT CAGGTCGTAG CTACAATCAA TCTGACTTAA GCTTAGCCAA AGACATTGCC TATCGTGCTG CCCTAGCGAT GGAGAATGCT CAACTGTATC GAGATGTTCA ACAAGCTTTA AAACATTATG CTGAATCATT GGCGCTTTTA GATGCCTTGT TGGCAGGCGC ACCTGTAGCA GTCTGTTTTT TGGATAAGGA ATTACGATAT CTCCGCATTA ATCAAGTATT AGCTGATCTC AATGGCTTGA GTATAGAAGA GCATCTGGGA CGAAAATTTC AGGATGTTTT ACCCAAGATG GCAGAGCAAT TTGAAGAGCA ATTGCAACAA GTATTGGAGA CGGGACAACC TCTGCTGAAT TTGGAGGTTA GTGGTGAGGC GCTAGGAAGA CCAGAAATTA ATAGCTATTG GTTAGGTAAT TATTACCCAG TCTACGACGG CATGGGCAAA ACAGTAGGCA TCGGGATTAT CCTGGCAGAT GTGACAGCTA CTAAGCAAGT AGAAATTGCT CTGCGAGAAA GTGAAGAACG CTTCCGAGCC ATGTTTGACC AAGCGGCTGT GGGCATTACC TTAGTTACCT TAGATGGTCA ATTTCTGCAA AATAATCCGG CTTTGTGCGA CATTACCGGT TACAGCTCTG AAGAATTAAG TCAGATGAAG TTTCCCGAAA TTACTCACCC TGATGATGTG GAAGCTGATT GGGCATACGC CAAGCAAGTA TTAGCCAAGG AAATTAATGG TTACTCTCTA GAAAAGCGTT ATCTTCGCAA AGATGGCACG ACTGTTTGGG TGAATCTGAC TGCATCAGCC GTATGGAATG AGCAGGGAGA ACCTAAATAT GCGTTGGGTA TTATTGAAGA TATTAATGAG CGCAAGCAAG CAGAAGCCGC ACAAAACTTT TTAGTTGAAG CCAGCACTAT TTTAGCAGCT TCTTTAGATT ATGAGGTTGC CCTGAATAAT GTGGCTCATT TGGCAGTACC TACCATTGCT GATTGGTGTG CTGTAGATAT TCTCCAAGCT GACTGGTCGA TTAAACGTGT AGCGATCGCC TGTGTTAATC CTGCAAAACT GGAGATTATA GAAGAAATTC GCCGTTCATA TCCAACCAGA ACCGAGGGCA AACACCCGTT TCGAGATAAA CTCCTCAAAG GAGCATCGGC TTTCTATCCT GAACTACCAA ACTCAATTTT GGTAGAGATA GCACAGGATG AACAACATTT ACAATTATTA CAAAGCTTGG AAATGCGATC GCTGATGGTG GTTCCCCTTT ACTCACGGGA GCAAATATTT GGGGTCATTT CCTTTGTTAC TGGTAGTTCA GGCAGGCAAC TCAAACAAAC AGATTTGGCA TTGGCAGAAG ATATCGCCCG ACGAGCAGCT ACAGCCATTG ATAATGCCAG ACTGTATCAG GAAACTCAGC AGGCGAAACA AGCCGCCGAG TTAGCAATGA GTCGAATGTT ACGTTTACAA AGCATCACAG CAGCGCTCTC CGAAGCCCTC ACGCCCCAAC AAGTTGCTGA TGTGGTAGTA AATCAAGGAT TAGCAGCTTT GGGAGCATCT GCTGGATCTG TGGTTCTGTT GACTGAAGGC GGTACTACCC TGAAAATCAT TCAAGCCATC GGCTACCCAG AATCGGTGCA AGATGCTTGG GAAACTTTCC CCCTAACTGC AACTGTACCA ATTGCGGAAA CCGCCAGGAC AGGGGAAGCG ATTTTTTTAG CTAACGTCAC AGAATTTGCC GCCAAATATC CACAAATTGC TAACGTCCCC TCCCTCACGG GTAATTGCGC TTTTGCTTGT ATTCCTCTCA TCGTCGAACA GCAGACAATT GGAGTGATGG CATTAAGCTT TGCCACAGCC CAAAAATTTA ACGAAGAACA GCAAAAATTT ATGTTGACAT TGGGTCAACA ATGCGCTCAG GCGATCGCTC GCTCTCAACT TTATGAAGCA GAAAAAAATG CCAGAGCTGT AGCCGAATCC ACTAACCGGA TTAAAGATGA ATTTTTGGCG GTTCTGTCCC ACGAATTGCG TACCCCCCTC AATCCCATCA TGGGTTGGGC TAAGTTACTC CGCACGCGCA CATATAAGGA AGAGACCATC AAGCAAGGTT TGGAAACAAT CGAGCGCAAC GCCAAGTTAC AAACTCAACT CATTGACGAC TTGCTGGATG TTTCCCGCAT CTTACGCGGT AAGCTGAATT TGAATGTCTG CCTAGTAGAT TTGAGAAACA CAGTTCAAGC TGGGTTAGAA ACAGTCCGTT TAGCCGCCGA AGCAAAATCA ATAGCAATTC ACACAATCTT GAGTGATGAA CCTGTACAGG TGATGGGTGA TGGCGATCGC TTGCAACAGG TCATCTGGAA TTTAGTCTCG AATGCCGTCA AGTTTACACC GTCGGAAGGA CGGGTAGAAG TGCGTTTAGA ACAGGTGGGA CGAGATGCCC AAATCCAAGT GATTGACACA GGTAAAGGCA TTACACCAGA ATTTTTACCT TATGTCTTTG AATACTTCCG TCAAGCAGAT GCCAAGACAA CCAGGGTATT CGGTGGCTTG GGTTTGGGAT TGGCAATTGT CCACCATCTT GTAGAATTAC ACGGTGGTAC AGTAGTAGCA CAGAGTGCCG GAGAAGACCA AGGAGCAACT TTTACTGTCA AGCTACCCTT GCATAAAAGT GCTGATTACC AAGTGCAGAG TGCTAAGTCT GCGGTTACAG AACTAGAGAA TCAAGACTCA CTATTGGCTG GTGTGCAGAT TCTTTTAGTT GATGATCAAG AAGATGTACG GGAATTTTTT AGCTTTGCTC TAGAACAGTG TGGGGCAACA GTAACTGCGG TAGCATCAGC CATAGAGGCA TTGGAAGCCC TAGCACGCTC AAAGGCAGAT GTACTGTTAA GTGATATTGG GATGCCACAA ATTGATGGTT ATATGTTGTT GCGGCAAATC AGAAAATGGT CGCCAGAACA AGGTGGACAA ATTCCAGCGA TCGCTCTGAC TGCCTATGCT GGAGAAATTG ATCAAAAACA AGCCATCGCC GCAGGCTTTC AAAAGCATAT AGCTAAACCC GCCGACCCAG TAGAGTTAGC TGAGGCGATC ACCCAACTCA TCGGGCGCAA ATAA
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Protein sequence | MPNIPISALL RFGIVIFSVA LACALMLLLD PWLGMTSTPF LLFFSAVMFS AWYGGFWSGV LGTFLSVILS NYFFFHPRYT LSIDTDNVVI IGLFAVQGWF FSFICEILRN TKKQDAVNLQ KLRQSEERFR LALSNSDIVV FQQDRDLRYR WIHNYQGVAS AEEIIGKSDN ELFPASVAEK LTAIKQKVLE KDVSVHEEVS VIFHGKVVYY DLLAEPLTID GQIQGITCAA VDITERKRSE LEKAKLQSKL QKAIEQQDEY LALLNAWLAS SPVALAFLDT KLRYVYTNEA LAAINGVPQS QHIGRTLREV LPEWATQLEP ILQQVMATKQ PLVNQEVCGV TYPSGVHRCS LVNYYPVCLP DGKLLGVGVT ALDITERKQA EDALRYIAQT SNTLSSSLDY EQTLAQIAKI SVPQLADWCS IDIINQDGSI RRLPIAHVDP TKAELARLFQ EYAPQLGSGS LVANVLQTGE QLLVADLPDS PLPADQNEEN LELLRQIGIK SLMLLPLIAH EQVLGCITFV SAESGRSYNQ SDLSLAKDIA YRAALAMENA QLYRDVQQAL KHYAESLALL DALLAGAPVA VCFLDKELRY LRINQVLADL NGLSIEEHLG RKFQDVLPKM AEQFEEQLQQ VLETGQPLLN LEVSGEALGR PEINSYWLGN YYPVYDGMGK TVGIGIILAD VTATKQVEIA LRESEERFRA MFDQAAVGIT LVTLDGQFLQ NNPALCDITG YSSEELSQMK FPEITHPDDV EADWAYAKQV LAKEINGYSL EKRYLRKDGT TVWVNLTASA VWNEQGEPKY ALGIIEDINE RKQAEAAQNF LVEASTILAA SLDYEVALNN VAHLAVPTIA DWCAVDILQA DWSIKRVAIA CVNPAKLEII EEIRRSYPTR TEGKHPFRDK LLKGASAFYP ELPNSILVEI AQDEQHLQLL QSLEMRSLMV VPLYSREQIF GVISFVTGSS GRQLKQTDLA LAEDIARRAA TAIDNARLYQ ETQQAKQAAE LAMSRMLRLQ SITAALSEAL TPQQVADVVV NQGLAALGAS AGSVVLLTEG GTTLKIIQAI GYPESVQDAW ETFPLTATVP IAETARTGEA IFLANVTEFA AKYPQIANVP SLTGNCAFAC IPLIVEQQTI GVMALSFATA QKFNEEQQKF MLTLGQQCAQ AIARSQLYEA EKNARAVAES TNRIKDEFLA VLSHELRTPL NPIMGWAKLL RTRTYKEETI KQGLETIERN AKLQTQLIDD LLDVSRILRG KLNLNVCLVD LRNTVQAGLE TVRLAAEAKS IAIHTILSDE PVQVMGDGDR LQQVIWNLVS NAVKFTPSEG RVEVRLEQVG RDAQIQVIDT GKGITPEFLP YVFEYFRQAD AKTTRVFGGL GLGLAIVHHL VELHGGTVVA QSAGEDQGAT FTVKLPLHKS ADYQVQSAKS AVTELENQDS LLAGVQILLV DDQEDVREFF SFALEQCGAT VTAVASAIEA LEALARSKAD VLLSDIGMPQ IDGYMLLRQI RKWSPEQGGQ IPAIALTAYA GEIDQKQAIA AGFQKHIAKP ADPVELAEAI TQLIGRK
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