Gene Ava_2759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2759 
Symbol 
ID3681887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3400885 
End bp3401379 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content42% 
IMG OID637718105 
Productpentapeptide repeat-containing protein 
Protein accessionYP_323267 
Protein GI75908971 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.741195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATT GGCGAGTAGT GGCTAGTTTT GTTTTAGCGA TGGTTTTATT TCTGTTTCCT 
GGGTCAGCGC AAGCTGCGAG TTCGTCTAGT ATCACCCGTT CAGCTGGTGA TGAACTGAAG
GCAAAGGATT TCTCTGGTCA AAGTTTAATT GGTTCTGAGT TTACCAATGT AGATTTAGAG
AATGCCAATT TTAGCAATGC TGACTTACGT GGTGGTGTAT TTAACGGGAC TGTGCTGGAG
GGGGTTAATT TGCATGGTGT GGATTTTAGT AACGGTATAG CTTATCTGGC AAGGTTTAAA
AATGCTGATT TAAGCGATGC TGTTTTGACT GATGCCATGA TGCTACGTTC TGTTTTTGAT
AATGTTGATG TCAGTGGGGC AGATTTTACT AATGCGGTTT TAGATGGAAC AGAGGTGAAA
AAACTCTGTG TTAAGGCCAG TGGGGTGAAT TCTAAGACTG GTGTTGATAC CCGTGAATCT
TTGGGTTGTC GCTAG
 
Protein sequence
MKYWRVVASF VLAMVLFLFP GSAQAASSSS ITRSAGDELK AKDFSGQSLI GSEFTNVDLE 
NANFSNADLR GGVFNGTVLE GVNLHGVDFS NGIAYLARFK NADLSDAVLT DAMMLRSVFD
NVDVSGADFT NAVLDGTEVK KLCVKASGVN SKTGVDTRES LGCR