| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2756 |
|---|
| Symbol | |
|---|
| ID | 3681884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 3396288 |
|---|
| End bp | 3397550 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637718102 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_323264 |
|---|
| Protein GI | 75908968 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.366084 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.663227 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCCCA CTGAACCTGC TGCTGTTAAT AATGGGTTTG GCGCACTGCT CAAAAACCGT
GGTTTTATGC TCCTGTGGAT TGGGCAACTA ATTTCCCAAT TAGCAGACAA GGTTTTTTTT
GTGTTAATGA TTGCCTTGTT GGAAGTGTAC CCAGCGCCCT CTGGATTACC AGAAAATTCC
ATGTACTCAA CTCTGATGGT GGCATTCACG ATTCCAGCAA TTTTGTTTGG TTCAGCCGGC
GGCATTTTTG TAGACCGCTT GCCCAAAAAG TTGATCATGG TTGGCTCCGA TATTGTGCGT
GGGCTTTTGA CCTTGTGTTT GCCATTTTTA CCCAGAGAGT TCCTGATTTT ACTCATACTC
ACCTTTGCTA TTTCCTCAGT AACACAGTTT TTTGCTCCTG CTGAACAGGC GGCAATTCCT
CTGTTAGTAA AGCGAGAAAA TTTAATGGCA GCCAATGCCT TGTTCAGCAG CACCATGATG
GGAGCTTTAA TAGTTGGTTT TGCTGTAGGA GAGCCAATTT TGAGTTGGTC AAAAAGCTTG
ATGGGGGAAA CTTACGGTCA AGAACTAGTG GTAGGGGGGT TGTATATCTT ATCGGGGTTG
CTCATGCAGC CCATAAAATT TACAGAACAC AAATCCCATC ATGATCAACT AACTAGCTCT
CATCCCTGGG CTGAATTTAC CGAAAGTATC CGTTACCTCA AAAAGAATCG CTTAGTCTTA
AATGCCATGC TGCAACTCAC AACCTTATAT TGTGTATTTG CCGCATTGAC AGTATTAACC
ATTCGGTTAG CCGAAGAATT TGGTTTAAAA GAGAAACAGT TTGGTTTTTT CCTAGCAGCA
GCAGGCGTAG GGATGGTAAT GGGTGCAGGA ATTTTAGGAC ATTGGGGTGA TAAATTCCAT
CACAAACCCT TACCTTTAAT CGGATTTCTG ATGATGGCAA TGGTTTTAGG TGTATTCACC
TTCACCCACA ATTTGGCGCT AGCTCTAGGA CTATGTGCAG TTTTGGGTAT AGGTGCGGCC
TTAATTGGTG TACCCATGCA AACTTTAATT CAACAGCAAA CACCACCAAC AATGCACGGT
AAAGTGTTTG GTTTTCAAAA TCATGCTGTA AACATAGCCT TGTCGTTACC TTTAGCAATT
ACCGGCCCTC TAACCGATGC TTTGGGTTTA CGGGTAGTTT TGATGACAAT GAGCGCAGTT
GTAGTAGTTG TTGGTGTTTG GGCTTGGAAA AATACCCGTA GAGTTTTGCA AGATGTAATT
TAG
|
|---|
| Protein sequence | MFPTEPAAVN NGFGALLKNR GFMLLWIGQL ISQLADKVFF VLMIALLEVY PAPSGLPENS
MYSTLMVAFT IPAILFGSAG GIFVDRLPKK LIMVGSDIVR GLLTLCLPFL PREFLILLIL
TFAISSVTQF FAPAEQAAIP LLVKRENLMA ANALFSSTMM GALIVGFAVG EPILSWSKSL
MGETYGQELV VGGLYILSGL LMQPIKFTEH KSHHDQLTSS HPWAEFTESI RYLKKNRLVL
NAMLQLTTLY CVFAALTVLT IRLAEEFGLK EKQFGFFLAA AGVGMVMGAG ILGHWGDKFH
HKPLPLIGFL MMAMVLGVFT FTHNLALALG LCAVLGIGAA LIGVPMQTLI QQQTPPTMHG
KVFGFQNHAV NIALSLPLAI TGPLTDALGL RVVLMTMSAV VVVVGVWAWK NTRRVLQDVI
|
|---|
| |