Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2756 |
Symbol | |
ID | 3681884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3396288 |
End bp | 3397550 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637718102 |
Product | major facilitator transporter |
Protein accession | YP_323264 |
Protein GI | 75908968 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.366084 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.663227 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCCCA CTGAACCTGC TGCTGTTAAT AATGGGTTTG GCGCACTGCT CAAAAACCGT GGTTTTATGC TCCTGTGGAT TGGGCAACTA ATTTCCCAAT TAGCAGACAA GGTTTTTTTT GTGTTAATGA TTGCCTTGTT GGAAGTGTAC CCAGCGCCCT CTGGATTACC AGAAAATTCC ATGTACTCAA CTCTGATGGT GGCATTCACG ATTCCAGCAA TTTTGTTTGG TTCAGCCGGC GGCATTTTTG TAGACCGCTT GCCCAAAAAG TTGATCATGG TTGGCTCCGA TATTGTGCGT GGGCTTTTGA CCTTGTGTTT GCCATTTTTA CCCAGAGAGT TCCTGATTTT ACTCATACTC ACCTTTGCTA TTTCCTCAGT AACACAGTTT TTTGCTCCTG CTGAACAGGC GGCAATTCCT CTGTTAGTAA AGCGAGAAAA TTTAATGGCA GCCAATGCCT TGTTCAGCAG CACCATGATG GGAGCTTTAA TAGTTGGTTT TGCTGTAGGA GAGCCAATTT TGAGTTGGTC AAAAAGCTTG ATGGGGGAAA CTTACGGTCA AGAACTAGTG GTAGGGGGGT TGTATATCTT ATCGGGGTTG CTCATGCAGC CCATAAAATT TACAGAACAC AAATCCCATC ATGATCAACT AACTAGCTCT CATCCCTGGG CTGAATTTAC CGAAAGTATC CGTTACCTCA AAAAGAATCG CTTAGTCTTA AATGCCATGC TGCAACTCAC AACCTTATAT TGTGTATTTG CCGCATTGAC AGTATTAACC ATTCGGTTAG CCGAAGAATT TGGTTTAAAA GAGAAACAGT TTGGTTTTTT CCTAGCAGCA GCAGGCGTAG GGATGGTAAT GGGTGCAGGA ATTTTAGGAC ATTGGGGTGA TAAATTCCAT CACAAACCCT TACCTTTAAT CGGATTTCTG ATGATGGCAA TGGTTTTAGG TGTATTCACC TTCACCCACA ATTTGGCGCT AGCTCTAGGA CTATGTGCAG TTTTGGGTAT AGGTGCGGCC TTAATTGGTG TACCCATGCA AACTTTAATT CAACAGCAAA CACCACCAAC AATGCACGGT AAAGTGTTTG GTTTTCAAAA TCATGCTGTA AACATAGCCT TGTCGTTACC TTTAGCAATT ACCGGCCCTC TAACCGATGC TTTGGGTTTA CGGGTAGTTT TGATGACAAT GAGCGCAGTT GTAGTAGTTG TTGGTGTTTG GGCTTGGAAA AATACCCGTA GAGTTTTGCA AGATGTAATT TAG
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Protein sequence | MFPTEPAAVN NGFGALLKNR GFMLLWIGQL ISQLADKVFF VLMIALLEVY PAPSGLPENS MYSTLMVAFT IPAILFGSAG GIFVDRLPKK LIMVGSDIVR GLLTLCLPFL PREFLILLIL TFAISSVTQF FAPAEQAAIP LLVKRENLMA ANALFSSTMM GALIVGFAVG EPILSWSKSL MGETYGQELV VGGLYILSGL LMQPIKFTEH KSHHDQLTSS HPWAEFTESI RYLKKNRLVL NAMLQLTTLY CVFAALTVLT IRLAEEFGLK EKQFGFFLAA AGVGMVMGAG ILGHWGDKFH HKPLPLIGFL MMAMVLGVFT FTHNLALALG LCAVLGIGAA LIGVPMQTLI QQQTPPTMHG KVFGFQNHAV NIALSLPLAI TGPLTDALGL RVVLMTMSAV VVVVGVWAWK NTRRVLQDVI
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