| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2732 |
|---|
| Symbol | |
|---|
| ID | 3682093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 3371379 |
|---|
| End bp | 3372416 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637718077 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_323240 |
|---|
| Protein GI | 75908944 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.216053 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGTA TTGAAGCCAA AAACCTGTGG CATCGATTAA ATAATTTGGC ACTAGTCCGC
TTTTTGCTGT TAGTTGCGGC TGGTTGGGCT ATCGTACAGC TTCTGGCTTA CTTTGAGACA
GTAATTGTCA TTTTTACGTT TGCAGCTATT TTGGCTTTTT TACTGAGCTA CCCTGTACAA
TGGCTACGCC GTTTTCTCCC CCACAACATT GCAGTTGTTG TAATTTTCCT AATCAGCATA
GTGATTTTAG GAGGATTACT GATTACTGTC GGTATAGCAA TTTTATCCCA GGGTCAACAA
TTAATTGACA GCATATCTGC TTTCTTAACT TCTTTGTTAC CTTTTTTGGA AAGAGTAGAG
GGTTTATTAC GTAACCGCAA TCTACAAATA GATTTAAGTG TAATTCAAGA ACAATTGCGA
ACCCAAGCTG TATCAACACT AGTTACGAGT TTGGCAATTG TGCAACAATT TCTCACTAAT
TTTGTGACAT TTATTTTAAT TGCCGTCGTA GCTTTTTTCA TGTTGCTAGA CGGTGAAAAG
CTTTGGAACT TTACTCTCAA AATAATCCCG CAAAAACGCC GCATTAGATT TACAAATATT
ATGCGACGCA GTTTTCTAGG ATTTTTTCGC GGTCAGTTAT TATTGTGCTT ATTCTTAACA
AGTTCAACAT TCATTATTTT CTTATTATTA CAAGTACCTT TTGCTTTAAT ACTGTCCGTA
ATAGTGGGAA TACTAGATAT CATTCCCGGT ATTGGAGCTA CTCTAGGTGT GGGAACAATT
ACTTTAATTG TCTTATCTCA AGATGTTTGG TTAGCATTAA AAGTATTAGT TGCTTGTGTA
GTCCTCCAGC AAATTCAAGA TAATTTAATT TCTCCTCGCA TTATGCAAGG AGCGCTAAAT
CTCAATCCGG TAGTAGTATT TTTTGCTTTA TTAGTAGGTG CTAGAGTCGC AGGGCTATTG
GGTGTTTTTA TCTCTATCCC AATCACGGGA GTTATTGTAT CTTTATTTGA AATTGATGAG
ATGAAATCTG AAGTTTAG
|
|---|
| Protein sequence | MSGIEAKNLW HRLNNLALVR FLLLVAAGWA IVQLLAYFET VIVIFTFAAI LAFLLSYPVQ
WLRRFLPHNI AVVVIFLISI VILGGLLITV GIAILSQGQQ LIDSISAFLT SLLPFLERVE
GLLRNRNLQI DLSVIQEQLR TQAVSTLVTS LAIVQQFLTN FVTFILIAVV AFFMLLDGEK
LWNFTLKIIP QKRRIRFTNI MRRSFLGFFR GQLLLCLFLT SSTFIIFLLL QVPFALILSV
IVGILDIIPG IGATLGVGTI TLIVLSQDVW LALKVLVACV VLQQIQDNLI SPRIMQGALN
LNPVVVFFAL LVGARVAGLL GVFISIPITG VIVSLFEIDE MKSEV
|
|---|
| |