Gene Ava_2722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2722 
Symbol 
ID3682083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand- 
Start bp3359490 
End bp3360119 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content41% 
IMG OID637718067 
Producthypothetical protein 
Protein accessionYP_323230 
Protein GI75908934 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.353362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.105632 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAATA ACTTGGAAAA TGATTCAATA TTTACACCAG AACAGGTTTT AGAAAATCGA 
GGGCGGGTTG CCATTTTCAT TGATGGGTCA AATCTATTCT ACGCTGCTTT GCAATTAGGA 
ATTGAAATAG ATTACACGAA ATTGCTATGT CGTTTGACTG GTGGTTCTCG ACTGTTGCGG 
GCTTTTTTCT ACACCGGTGT AGACAGAACT AATGAAAAGC AGCAAGGGTT TTTGTTGTGG 
ATGCGCCGTA ATGGTTACCG TGTGATTGCT AAAGATTTGG TACAGTTGCC AGACGGTTCC 
AAAAAAGCCA ACCTAGACGT AGAAATAGCT GTAGATATGA TGGCTTTAGT TGATTCTTAC 
GATACGGCTG TACTAGTCAG TGGTGACGGG GATCTGGCTT ATGCAGTCAA TTCTGTTAGT 
TATCGTGGCG TGCGGGTAGA AGTTGTGAGC TTACGCTCTA TGACTAGTGA TAGCTTAATT 
AATGTGAGCG ATCGCTATAT TGATTTAGAG GCTATCAAAG AAGATATCCA GAAAACTCCT 
CGCCAAAGCT ATCCTTATCG ACCTTTATCT AGCATGGGTT TTTTAGATGA TCCCAGAGAT 
AGCGACGGAC ACCTAGAAAT GCAGGATTAA
 
Protein sequence
MLNNLENDSI FTPEQVLENR GRVAIFIDGS NLFYAALQLG IEIDYTKLLC RLTGGSRLLR 
AFFYTGVDRT NEKQQGFLLW MRRNGYRVIA KDLVQLPDGS KKANLDVEIA VDMMALVDSY 
DTAVLVSGDG DLAYAVNSVS YRGVRVEVVS LRSMTSDSLI NVSDRYIDLE AIKEDIQKTP 
RQSYPYRPLS SMGFLDDPRD SDGHLEMQD