Gene Ava_2720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2720 
Symbol 
ID3682081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3356516 
End bp3358123 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content35% 
IMG OID637718065 
Producthypothetical protein 
Protein accessionYP_323228 
Protein GI75908932 
COG category[S] Function unknown 
COG ID[COG5305] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.245716 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCATA TAAAACTCGT GCCGAGTTGG TTGCGGTTTT TAATGATTTT ACTTTTAGTA 
ATGTGTATAC TATTCCGATT TGTATATGTT GAGAGGAAGG TATATTCTTT AGATGAAAGC
TATACTTCTC TAAGGATCTC TGGCTATACT TTAGCTGAAG TAAAACAGCA ATTATTTAAC
AATCAGGTAA TCTCTCAGGA AAGCTTTACA GAATTTCAAA GCCCCAATTT GAATAAAAAT
ATTAGTGACA CAGTGATGTC TCTCATAATT GAAAGTCCAG AGAAATCACC GTTATATTTT
ATAATAGCTA GATTTTGGGT GGAAAGATTT GGCAACTCTG TAACTGTAAT TAGATATTTA
TCAGCACTAA TTAGTTTATT AGTTTTCCCG TGCCTTTATT GGTTTTGTCG AGAGTTATTT
AATGTAACTT TATCGCTGCC TAGTTTAGCG ATCGCTCTCA TGGCTAACTC ACCCATGCAC
CTAGTATACG CCCAAGAAGG CAGGGAGTAT ATCCTTTGGT TAGTGACTAT CATACTTGCT
AGCACTGCAT TACTAAGAGC GATACGTCTG CAATCAAACC AGAAATCAGA TCCCTTCACA
ACCTGGGGAA TCTATGTGAT TACACTGACA CTGAGTTTGT ATACTTGCTT GTGGACTATC
TTTGTGGCGA TCGCTCATGG TATTTATGTA GTGTTAGTTG CTAAACTACG CTTGAACGAA
ACTGTTAGAT ATTATCTGAT AGCCACGATT TTCGCTGTTT TCGCATTTTT CCCTTGGTTA
TTGGTCGTTT TTGCTAAGTT CTTTCAATTT GTCCTCTCAT CAGATGGTAC AAATAATTCA
GACCCAAATA TCATACCCCT AATTCCTTTC TTACTCGTAC AGATGAGTAG GAGTTTTTTT
GATTTAAATA TTAGTTTAGA TAATCCAATT AATTATTTAA TATCCGCTAT TTTTTTAATT
TTAGCCGCAT ATGCTATTTA TTTTTTATGT CGCACAACTA ACTACCAAGT TTGGCTATTT
ATCATTACTT TGATTGTAGT ACCTGCTTTG CCATTAATCT TACCAAATTT GGCTTCTGGT
CGCATTAGTC CGGGTTGCGA ACCCTATTTA CTACCGTCTT ATTTAGGCAT ACAAATTATT
TTTGCTTACT TACTCGCTAC ACAGATGTAT AACGGTAAGG TGTCACATCG AAGAATCTGG
CAAATAGTTA TTGGACTATT AATTATTTGT AGCTTAATTT CTTCCAGAGT GTATTACCAA
GCAGACACTT GGTGGAGTAA GGGCGTAAGT TCCGGTAATC CTCAAATTGC TAGATTTATT
AATCAAAAAT ATCGTCCATT ATTAATTACT AATTTTTCTG AGATTAATTA TGGCAATGTT
GTTTCTTTAA GTTATCTTTT AGAACCAAAG GTGAGATTTC AATTAGTACC GGATCAAACT
GTGCCTATCA TACCTAATGA TTTTACTGAT ATTTTCCTAC TCAACCCCAC AAATGCTTGG
CGGTTGCAAA TAGCTAGAAA GTATCAGTTA AAGCCAAATC TTGTCTATGG AGATGACTAT
TACTTAGTTT GGAAATTAGT TCAACCTACC TCGAACGGGG AGTTTTAA
 
Protein sequence
MRHIKLVPSW LRFLMILLLV MCILFRFVYV ERKVYSLDES YTSLRISGYT LAEVKQQLFN 
NQVISQESFT EFQSPNLNKN ISDTVMSLII ESPEKSPLYF IIARFWVERF GNSVTVIRYL
SALISLLVFP CLYWFCRELF NVTLSLPSLA IALMANSPMH LVYAQEGREY ILWLVTIILA
STALLRAIRL QSNQKSDPFT TWGIYVITLT LSLYTCLWTI FVAIAHGIYV VLVAKLRLNE
TVRYYLIATI FAVFAFFPWL LVVFAKFFQF VLSSDGTNNS DPNIIPLIPF LLVQMSRSFF
DLNISLDNPI NYLISAIFLI LAAYAIYFLC RTTNYQVWLF IITLIVVPAL PLILPNLASG
RISPGCEPYL LPSYLGIQII FAYLLATQMY NGKVSHRRIW QIVIGLLIIC SLISSRVYYQ
ADTWWSKGVS SGNPQIARFI NQKYRPLLIT NFSEINYGNV VSLSYLLEPK VRFQLVPDQT
VPIIPNDFTD IFLLNPTNAW RLQIARKYQL KPNLVYGDDY YLVWKLVQPT SNGEF