Gene Ava_2709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2709 
Symbol 
ID3682207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3345213 
End bp3345959 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content49% 
IMG OID637718054 
Productpyridoxine 5'-phosphate synthase 
Protein accessionYP_323217 
Protein GI75908921 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0854] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00559] pyridoxine 5'-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0109345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.269213 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTAG ATAGGGAGAT ATTCGCCTTG GCTACTCTTG GGGTAAACAT TGACCATATC 
GCTACCATTC GACAAGCGCG GCGGACGGTG GAACCAGACC CTGTGGCGGC GGCGGTGCTG
GCAGAATTAG GTGGTGCTGA TGGCATCACC GTACATCTAC GGGAAGACCG TAGGCATATC
CAAGACCGGG ATGTACAACT GTTGCGCCAA ACTGTGCGTA CTCACCTGAA TTTGGAAATG
GCGGCTACAG ACGAAATGGT GGGAATAGCC CTTGACATTA AACCCGATTA TGTGACACTG
GTTCCCGAAA AACGGGAAGA AGTTACCACA GAGGGTGGTT TAGATATTGT TGGTCAAATT
GCTAGAATAG GTGAGGTCGT CAGTAAATTG CAGAATGCTG CCATTCCTGT GAGCTTGTTT
ATTGATGCTG AACCAGCACA AATAGAGGCA TCTGTCAAGG TACAAGCAAA GTTTATTGAA
CTGCACACTG GCAGGTATGC TGAGGCGACC GACGAGACTA GCCGTCAGCA AGAGCTAGCA
TTTTTGGCTA CAGGGTGTGA ACAAGCGATT AAAGCCGGAC TAAGAGTCAA CGCTGGTCAT
GGACTCACCT ACTGGAACGT TTACCCCGTG GCTGCACTTC CAGGGATGGA AGAACTCAAT
ATTGGTCACA CCATTATCAG CCGAGCGGCT TTAGTAGGAA TAGAAAGAGC TGTTCGAGAA
ATGAAACAGG CGATAAGAGG GGAGTAG
 
Protein sequence
MTVDREIFAL ATLGVNIDHI ATIRQARRTV EPDPVAAAVL AELGGADGIT VHLREDRRHI 
QDRDVQLLRQ TVRTHLNLEM AATDEMVGIA LDIKPDYVTL VPEKREEVTT EGGLDIVGQI
ARIGEVVSKL QNAAIPVSLF IDAEPAQIEA SVKVQAKFIE LHTGRYAEAT DETSRQQELA
FLATGCEQAI KAGLRVNAGH GLTYWNVYPV AALPGMEELN IGHTIISRAA LVGIERAVRE
MKQAIRGE