Gene Ava_2708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2708 
Symbol 
ID3682206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3344381 
End bp3345100 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content43% 
IMG OID637718053 
Productpathogenesis related protein-like 
Protein accessionYP_323216 
Protein GI75908920 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0164761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.427964 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAA CACAATCTAA TGACCTTCCA CTTTGGGTGC AGGACAGAGA CCTGGTAATT 
GCTGAAAGTA CTGATGTTCA ATGGCGGTAT CAGACTCCTC CAGACTATTC TCGCTCTAAA
GAAAATCTTG CCAATGAAAG TACACGCAAT CATCTAGAGG GTACACTGGA GGCGATCGTA
CAGAATTTAG TGAGAACCTT CGAGATGGAG GTATCTTTTA AGACTGATCC ACAGCAATGG
TTGTCGATTG TCAACGACCA GTTCCGCGTC AGTACTAATG GAGGACCAGA ATTCACAGCA
GAAGATGTAT CTGCCCAAGG CACTTACAAT CTATTTATGG CGGATTCTGA ACATTACAAA
GCATCACAAG AAAGCTTTGA ATCATCTGCT AAACTCTTCC ATACCACATT TCCTCAAGGC
TTTCCTTGGG AAGTACTGGA AGTCTACTCA GGGCCACCAA CTGTAACATT CAAATGGCGA
CACTGGGGAC ATTTTCAAGG TGCTTACAAA GATTACGCAC CGACTGGAGA GACAGTAGAG
ATCATCGGCT TGAGTGTTGC TCATGTCACA GATGACTTAA AAATTATTTC TTTGGAACAC
TATTTCGACA ACACGCTGTT CTTAGACAAG TTAACAGCTG GTGGTAAACA GGCAAATGGT
AAACCCGAAG GAAGAGGTTG TCCTTTTAGT TCTTGGTTTA AAAAATCTCC CAAGAGTTAG
 
Protein sequence
MSATQSNDLP LWVQDRDLVI AESTDVQWRY QTPPDYSRSK ENLANESTRN HLEGTLEAIV 
QNLVRTFEME VSFKTDPQQW LSIVNDQFRV STNGGPEFTA EDVSAQGTYN LFMADSEHYK
ASQESFESSA KLFHTTFPQG FPWEVLEVYS GPPTVTFKWR HWGHFQGAYK DYAPTGETVE
IIGLSVAHVT DDLKIISLEH YFDNTLFLDK LTAGGKQANG KPEGRGCPFS SWFKKSPKS