Gene Ava_2700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2700 
Symbol 
ID3682198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3338100 
End bp3339221 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content40% 
IMG OID637718045 
Producthypothetical protein 
Protein accessionYP_323208 
Protein GI75908912 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.19448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.72788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTCAG TAAATAAATT ACCCAGATGG TTAACCGTTG GTTTGGCGTT TCCTGTTGCC 
ATTCTCAACG GTTGGCTACT GCTTCAAGTT GTGCAGTATT TCCAACCCTT GGTGAATGTT
GTTGCAGCTG CTATCTTGCT GGCTTTTGTT TTGAACTACC CAATTCAGTT TTTCCAAGAA
CGGGGGGTAA AACGTAACTT GGCTATTGGC AGTGTATTAC TGCTGGCTGT GGTGATTTTA
GTCGGGTTAG GTGTGACTTT AGTGCCTCTC ATCATAGAAC AGCTCAACGA ACTGGTTAAT
ATTCTGCCTT ATTGGATTGA TTCTGGAGGT CAACAGATTG ACGCTTTCCA AAAATGGGCA
GCTACTCAAC AGTTACCTGT AAATTTAAGT GGTTTAGTCA CGCAGATTTT AGAGAGGGTA
TCTAGCCAAT TACAGTCTGT GACAGGAAGG ATTCTGGGTT TTGCCTTTGA TACGATTGGT
GTTGTGGTTA ATGTACTGCT GACAGTAGTA TTGACTATCT ACATGGTATT AAATGGCGAT
CGCCTTTGGG ATGGTCTTTA CCAATGGTTT CCTACCCATA TTGGTTCTAA GGTGCGGCAA
ATACTACGGG AGGATTTTCA CAATTATTTT ATTGGTCAAG CTACCTTAGG AGCTATACTG
GGGCTGACTA TTACATTGGC GTTTGTAACC CTGCGAGTAC CTTTGGCTTT ACTTTTTGGT
TTGGCAATTG GTTTATTTTC TCTTTTTCCC TTTGGTACAG GTATCGGTAT CTCTATTGTT
AGTCTATTGG TGGCGCTACA AAACTTTTGG TTGGGGGGAG AAGTCTTAGG TGTTGCGGTT
GCTATTGACC AAGTAAATTC TAATTTTATT GCCCCAAGAA TTCTGGGTAA TTTAACTGGT
TTAAATCCTG TTTGGGTAGT TATTTCTTTG CTGCTAGGCG CTAAATTAGG TGGTGTTTTG
GGTTTATTAA TTGCCATTCC TACAGCTAGT TTCATCAAGG ATATAGCTGA CAGTTGGCGC
TCTGGAGAAT TAAACGCCAT AAATGCTCTG GATGTAGAAC CGAAAAAAGT AGAAATTGAT
GTTAACGTTT CTTCAATAGA ATTATTCACA AAAAAAGAAT GA
 
Protein sequence
MQSVNKLPRW LTVGLAFPVA ILNGWLLLQV VQYFQPLVNV VAAAILLAFV LNYPIQFFQE 
RGVKRNLAIG SVLLLAVVIL VGLGVTLVPL IIEQLNELVN ILPYWIDSGG QQIDAFQKWA
ATQQLPVNLS GLVTQILERV SSQLQSVTGR ILGFAFDTIG VVVNVLLTVV LTIYMVLNGD
RLWDGLYQWF PTHIGSKVRQ ILREDFHNYF IGQATLGAIL GLTITLAFVT LRVPLALLFG
LAIGLFSLFP FGTGIGISIV SLLVALQNFW LGGEVLGVAV AIDQVNSNFI APRILGNLTG
LNPVWVVISL LLGAKLGGVL GLLIAIPTAS FIKDIADSWR SGELNAINAL DVEPKKVEID
VNVSSIELFT KKE