Gene Ava_2678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2678 
Symbol 
ID3682039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3312343 
End bp3312849 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content38% 
IMG OID637718023 
Productpentapeptide repeat-containing protein 
Protein accessionYP_323186 
Protein GI75908890 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGA TTTTCATAAA ATTGTTTGGT TTAATTGTGA TTGTGATGCT GGCTTGGTTT 
TGGGTAATTA TTGATACTCA TCCGGCATTT GCTCAGATAA ATACAATTAA CTACAACAAT
GCAAATCTGG AAAACCGTGA CTTTGCCAAT GCTGATTTAG TAGGGGTCAA TTTTGTCGCG
GCGGAAATGC GAGGAACAAA CTTTCAAGGC GCAAATTTAA CTAATGCTAT TCTCACCAAA
GGTGTTTTAT TAAAGGCTAA TTTGTCAGAG GCAAATTTGA CAGGCGCTTT AGTAGATAGA
GTAACTTTAG ACAATGCAAA TTTAAAAAAT GCCATTTTCA CAGAAGCAAC TTTAACCCGT
AGTCGCTTCT ATGATGCTGA CATTACTGGT GCTGATTTTA CAGATGCGAT AATCGATCGC
TATCAAGTTT CTTTACTGTG TGAAAGAGCC GATGGAGTAA ATCCCGTTAC AGGTGTTGCT
ACCCGCGATA GTCTGGGCTG TAAATAA
 
Protein sequence
MNKIFIKLFG LIVIVMLAWF WVIIDTHPAF AQINTINYNN ANLENRDFAN ADLVGVNFVA 
AEMRGTNFQG ANLTNAILTK GVLLKANLSE ANLTGALVDR VTLDNANLKN AIFTEATLTR
SRFYDADITG ADFTDAIIDR YQVSLLCERA DGVNPVTGVA TRDSLGCK