| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2668 |
|---|
| Symbol | dcd |
|---|
| ID | 3682029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 3298352 |
|---|
| End bp | 3298951 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637718013 |
|---|
| Product | deoxycytidine triphosphate deaminase |
|---|
| Protein accession | YP_323176 |
|---|
| Protein GI | 75908880 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0717] Deoxycytidine deaminase |
|---|
| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0838153 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATTAAGA ACGACATCTG GATTACTGAA ATGGCTCAAA AAGGGATGAT TGCTCCTTTT
GAGTCTAGTT TAATCCGAAA AATTCCCAAA GATAACCTTG TAGCCGCTCA ACCCGTCATC
AGCTACGGCT TGTCTTCTTA CGGCTACGAT ATTCGCCTCT CATCAGCTGA GTTCCGCATT
TTTCGCCACA TCCCTGGAAC TGTAGTTGAT CCCAAAAACT TTAATCCCCA AAATTTGGAA
CCAACACCGC TACATACAGA TAAAGATGGC AGTTACTTTA TCTTGCCAGC GCATAGTTAT
GGTTTGGGGG TTGCCCTGGA AAAACTAGAG GTGCCAAATA ATATTACAGT CATTTGCATA
GGTAAAAGCA CGTATGCTCG CTGTGGTATT ATAGCTAACT TAACACCTGC GGAAGCGGCT
TGGCGGGGTC ATTTAACTCT AGAGTTTTCT AATTCTTCTA GTGCTGACTG TCGTATCTAC
GCTGATGAAG GCGTTGTACA ATTACTCTTC TTGGAGGGTG AACCTTGTGC TATAAGTTAC
GAAACACGTC AGGGTAAATA TCAGGATCAG TTGGAGAAGG TGACTCTGGC TAAAGTTTAG
|
|---|
| Protein sequence | MIKNDIWITE MAQKGMIAPF ESSLIRKIPK DNLVAAQPVI SYGLSSYGYD IRLSSAEFRI
FRHIPGTVVD PKNFNPQNLE PTPLHTDKDG SYFILPAHSY GLGVALEKLE VPNNITVICI
GKSTYARCGI IANLTPAEAA WRGHLTLEFS NSSSADCRIY ADEGVVQLLF LEGEPCAISY
ETRQGKYQDQ LEKVTLAKV
|
|---|
| |